DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idh3b and idha-1

DIOPT Version :9

Sequence 1:NP_001163682.1 Gene:Idh3b / 42586 FlyBaseID:FBgn0038922 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_492330.2 Gene:idha-1 / 172655 WormBaseID:WBGene00009664 Length:358 Species:Caenorhabditis elegans


Alignment Length:331 Identity:151/331 - (45%)
Similarity:208/331 - (62%) Gaps:20/331 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 TLIPGDGVGPELVYSLQEVFKAASVPVDFECYFLSEINPVLSAKLEDVVASI--------QKNKV 97
            |||||||:|||:..|:|::|:||..|:.::..   ::.||   |..|.|..|        ..|||
 Worm    28 TLIPGDGIGPEISASVQKIFEAADAPIAWDPV---DVTPV---KGRDGVFRIPSRCIELMHANKV 86

  Fly    98 CIKGVLATPDYSNVG-DLQTLNMKLRNDLDLYANVVHVRSLPGVKTRHTNIDTVIIREQTEGEYS 161
            .:||.|.||    :| ..::||:.:|.:..|||||...|||.|.||.:.|:|.|.|||.||||||
 Worm    87 GLKGPLETP----IGKGHRSLNLAVRKEFSLYANVRPCRSLEGHKTLYDNVDVVTIRENTEGEYS 147

  Fly   162 ALEHESVPGIVECLKIITAKKSMRIAKFAFDYATKNQRKKVTAVHKANIMKLGDGLFLRSCEEVS 226
            .:|||.|||:|:.:|:||...|..:|.|||:||.:|.||.||||||||||:..|||||..|.|.:
 Worm   148 GIEHEIVPGVVQSIKLITETASRNVASFAFEYARQNGRKVVTAVHKANIMRQSDGLFLSICREQA 212

  Fly   227 RLYPRIQFEKMIVDNTTMQMVSNPNQFDVMVTPNLYGAIVDNLASGLVGGAGVVAGASYSSESVV 291
            .|||.|:|::..:|...:.||.:|:|:||:|.|||||.|:.:|.:|||||.||....:....:.|
 Worm   213 ALYPDIKFKEAYLDTVCLNMVQDPSQYDVLVMPNLYGDILSDLCAGLVGGLGVTPSGNIGKGAAV 277

  Fly   292 FEPGARHTFAEAVGKNVANPTAMLLCGVKLLRHINLPTYGEIIQNAINKVLNDGKVRTKDLGGQS 356
            || ....|..:..|::.|||||:||..|.:||::|||.:...|:.|:...:.||:.:|.||||..
 Worm   278 FE-SVHGTAPDIAGQDKANPTALLLSAVMMLRYMNLPQHAARIEKAVFDAIADGRAKTGDLGGTG 341

  Fly   357 TTQDFT 362
            |...||
 Worm   342 TCSSFT 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idh3bNP_001163682.1 Iso_dh 37..369 CDD:294303 151/331 (46%)
idha-1NP_492330.2 Iso_dh 22..354 CDD:294303 151/331 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0473
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53770
OrthoDB 1 1.010 - - D325037at33208
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.830

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