DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idh3b and idhg-2

DIOPT Version :9

Sequence 1:NP_001163682.1 Gene:Idh3b / 42586 FlyBaseID:FBgn0038922 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_491989.1 Gene:idhg-2 / 172430 WormBaseID:WBGene00016266 Length:373 Species:Caenorhabditis elegans


Alignment Length:341 Identity:160/341 - (46%)
Similarity:225/341 - (65%) Gaps:13/341 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 YGANRTTCTLIPGDGVGPELVYSLQEVFKAASVPVDFECYFLSEINPVLSAKLEDVVASIQKNKV 97
            ||...|.|.| ||||:|||::..::.:|.....||:||...:|  :.:|...::..:.:|::|.|
 Worm    32 YGGRHTVCAL-PGDGIGPEMIAHIRNIFSFCHAPVNFEEVQVS--SSLLDGDMDAAMLAIERNGV 93

  Fly    98 CIKGVLAT----PDYSNVGDLQTLNMKLRNDLDLYANVVHVRSLPGVKTRHTNIDTVIIREQTEG 158
            .|||.:.|    |.::      :.|::||..||||||::|..::|.|.|||:.||.|:|||.|||
 Worm    94 AIKGNIETKHDDPQFN------SRNVELRTKLDLYANILHCVTIPTVPTRHSGIDIVLIRENTEG 152

  Fly   159 EYSALEHESVPGIVECLKIITAKKSMRIAKFAFDYATKNQRKKVTAVHKANIMKLGDGLFLRSCE 223
            |||.||||:||||||.:||:|.:|..||::.||:||..|.||||||||||||.||||||||:...
 Worm   153 EYSGLEHEAVPGIVESIKIVTREKIERISRMAFEYAKANGRKKVTAVHKANIQKLGDGLFLKVVR 217

  Fly   224 EVSRLYPRIQFEKMIVDNTTMQMVSNPNQFDVMVTPNLYGAIVDNLASGLVGGAGVVAGASYSSE 288
            ::|..|..|:||.|||||.:||:||.|.||||||.|||||.|:.|:|.|||||.|:|:|.:...:
 Worm   218 DMSEDYKDIKFEAMIVDNASMQLVSKPQQFDVMVMPNLYGNIISNIACGLVGGPGLVSGMNLGDK 282

  Fly   289 SVVFEPGARHTFAEAVGKNVANPTAMLLCGVKLLRHINLPTYGEIIQNAINKVLNDGKVRTKDLG 353
            ..|||.|.|:|.....||::|||||.:...|.:||::....:..||.:|:.|.|.:.::.|.|:|
 Worm   283 YAVFETGTRNTGTSLAGKDIANPTAFIRASVDMLRYLGCHYHANIISDALWKALVEQRIHTADIG 347

  Fly   354 GQSTTQDFTRAIILNM 369
            |.::..|...|.:.|:
 Worm   348 GNNSASDVINATLQNI 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idh3bNP_001163682.1 Iso_dh 37..369 CDD:294303 157/335 (47%)
idhg-2NP_491989.1 Iso_dh 33..363 CDD:294303 158/338 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0473
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53770
OrthoDB 1 1.010 - - D325037at33208
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101342
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R585
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.760

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