DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idh3b and Idh3b

DIOPT Version :9

Sequence 1:NP_001163682.1 Gene:Idh3b / 42586 FlyBaseID:FBgn0038922 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_570954.1 Gene:Idh3b / 170718 MGIID:2158650 Length:384 Species:Mus musculus


Alignment Length:366 Identity:218/366 - (59%)
Similarity:277/366 - (75%) Gaps:6/366 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MLARTVGRTFMQAAAARSLHTTSTLRATDNYGANRTTCTLIPGDGVGPELVYSLQEVFKAASVPV 67
            :.||..|.  .:.....:.|..|..:|.|.........|::|||||||||:::::||||||:|||
Mouse    15 LAARNSGA--WRGLGTSTAHAASQSQAQDVRVEGAFPVTMLPGDGVGPELMHAVKEVFKAAAVPV 77

  Fly    68 DFECYFLSEI-NPVLSAKLEDVVASIQKNKVCIKGVLATP-DYSNVGDLQTLNMKLRNDLDLYAN 130
            :|:.:.|||: |.....|||.|::|:::|||.|.|.:.|| :|.  |:|.:.:|:||..|||:||
Mouse    78 EFKEHHLSEVQNMASEEKLEQVLSSMKENKVAIIGKIYTPMEYK--GELASYDMQLRRKLDLFAN 140

  Fly   131 VVHVRSLPGVKTRHTNIDTVIIREQTEGEYSALEHESVPGIVECLKIITAKKSMRIAKFAFDYAT 195
            ||||:||||.||||.|:|.||||||||||||:|||||..|::|||||:|..||.|||||||||||
Mouse   141 VVHVKSLPGYKTRHNNLDLVIIREQTEGEYSSLEHESAKGVIECLKIVTRTKSQRIAKFAFDYAT 205

  Fly   196 KNQRKKVTAVHKANIMKLGDGLFLRSCEEVSRLYPRIQFEKMIVDNTTMQMVSNPNQFDVMVTPN 260
            |..|.|||||||||||||||||||:.||||:.|||:|:||.||:||..||:|.||.||||:|.||
Mouse   206 KKGRSKVTAVHKANIMKLGDGLFLQCCEEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPN 270

  Fly   261 LYGAIVDNLASGLVGGAGVVAGASYSSESVVFEPGARHTFAEAVGKNVANPTAMLLCGVKLLRHI 325
            |||.|:||||:|||||||||.|.|||:|..|||.||||.||:|||:|:||||||||....:|||:
Mouse   271 LYGNIIDNLAAGLVGGAGVVPGESYSAEYAVFETGARHPFAQAVGRNIANPTAMLLSATNMLRHL 335

  Fly   326 NLPTYGEIIQNAINKVLNDGKVRTKDLGGQSTTQDFTRAII 366
            ||..:..:|.:|:.||:..|||||:|:||.|||.||.:::|
Mouse   336 NLEYHSSMIADAVKKVIKAGKVRTRDMGGYSTTTDFIKSVI 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idh3bNP_001163682.1 Iso_dh 37..369 CDD:294303 211/332 (64%)
Idh3bNP_570954.1 Iso_dh 46..379 CDD:351095 211/335 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849839
Domainoid 1 1.000 423 1.000 Domainoid score I619
eggNOG 1 0.900 - - E1_COG0473
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5035
Inparanoid 1 1.050 427 1.000 Inparanoid score I1731
Isobase 1 0.950 - 0 Normalized mean entropy S528
OMA 1 1.010 - - QHG53770
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 1 1.000 - - oto93211
orthoMCL 1 0.900 - - OOG6_101342
Panther 1 1.100 - - LDO PTHR11835
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R585
SonicParanoid 1 1.000 - - X1965
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

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