DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idh3b and idh3b

DIOPT Version :9

Sequence 1:NP_001163682.1 Gene:Idh3b / 42586 FlyBaseID:FBgn0038922 Length:370 Species:Drosophila melanogaster
Sequence 2:XP_031750449.1 Gene:idh3b / 100144949 XenbaseID:XB-GENE-5825105 Length:381 Species:Xenopus tropicalis


Alignment Length:367 Identity:226/367 - (61%)
Similarity:280/367 - (76%) Gaps:6/367 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LARTVGRTFMQAAAARSLHTTSTL--RATDNYGANRTTCTLIPGDGVGPELVYSLQEVFKAASVP 66
            |..|..:.:.|.:.||....||.|  :|...........|:||||||||||::|::||||||.||
 Frog     8 LRSTQSQLYPQISLARRPLCTSPLVQQAEPGKSDGAFHVTMIPGDGVGPELMHSVREVFKAADVP 72

  Fly    67 VDFECYFLSEI-NPVLSAKLEDVVASIQKNKVCIKGVLATP-DYSNVGDLQTLNMKLRNDLDLYA 129
            |:|:.:.|||: |.....||::|:||:|.|||.|||.:.|| :|.  |:|.:..|:||..|||:|
 Frog    73 VEFDEHHLSEVQNMASKEKLDEVLASMQANKVAIKGKIHTPMEYK--GELASYEMRLRRKLDLFA 135

  Fly   130 NVVHVRSLPGVKTRHTNIDTVIIREQTEGEYSALEHESVPGIVECLKIITAKKSMRIAKFAFDYA 194
            |||||.||||.||||.|:|.||||||||||||:||||||.|::|||||||.:||.||||||||||
 Frog   136 NVVHVNSLPGYKTRHNNLDLVIIREQTEGEYSSLEHESVSGVIECLKIITREKSNRIAKFAFDYA 200

  Fly   195 TKNQRKKVTAVHKANIMKLGDGLFLRSCEEVSRLYPRIQFEKMIVDNTTMQMVSNPNQFDVMVTP 259
            ||..|.|||||||||||||||||||:.|:||::|||:|||:.||:||..||:|.||.||||:|.|
 Frog   201 TKKGRSKVTAVHKANIMKLGDGLFLQCCKEVAQLYPKIQFDTMIIDNCCMQLVQNPYQFDVLVMP 265

  Fly   260 NLYGAIVDNLASGLVGGAGVVAGASYSSESVVFEPGARHTFAEAVGKNVANPTAMLLCGVKLLRH 324
            ||||.|:||||:|||||||||.|.|||:|..|||.||||.||:|||:|:||||||||....:|||
 Frog   266 NLYGNIIDNLAAGLVGGAGVVPGESYSAEYAVFETGARHPFAQAVGRNIANPTAMLLSATNMLRH 330

  Fly   325 INLPTYGEIIQNAINKVLNDGKVRTKDLGGQSTTQDFTRAII 366
            :||..:..:|.:|:.||:..|||||:|:||.|||.||.:|:|
 Frog   331 LNLEYHSNLISDAVKKVIKQGKVRTRDMGGYSTTTDFIKAVI 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idh3bNP_001163682.1 Iso_dh 37..369 CDD:294303 217/332 (65%)
idh3bXP_031750449.1 Iso_dh 42..375 CDD:412380 217/333 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 433 1.000 Domainoid score I579
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H5035
Inparanoid 1 1.050 435 1.000 Inparanoid score I1652
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D325037at33208
OrthoFinder 1 1.000 - - FOG0000244
OrthoInspector 1 1.000 - - oto103463
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1965
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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