DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Qsox3 and qsox2

DIOPT Version :9

Sequence 1:NP_650997.1 Gene:Qsox3 / 42582 FlyBaseID:FBgn0038918 Length:562 Species:Drosophila melanogaster
Sequence 2:XP_009300239.1 Gene:qsox2 / 559603 ZFINID:ZDB-GENE-110203-4 Length:656 Species:Danio rerio


Alignment Length:558 Identity:148/558 - (26%)
Similarity:270/558 - (48%) Gaps:79/558 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LYSKEDNIHVVVGASLKKILAEPAMGKLVQFLNSYCGNCRRFAHTFRKMAVDLQKWNRVLRIYAV 99
            ||::||.:.::...|||:.:...:...||||.:|:||:|.:::.|::.:|.|::.|.:.:||..|
Zfish    25 LYTEEDPVVILSSDSLKQTVLNSSSAWLVQFYSSWCGHCIQYSPTWKALAGDVKDWAQAIRIGVV 89

  Fly   100 DCARLENVKLCRDFRITLTPTIRYY-----PSKFQRIRHGIGTDIETTIPSEIADQLIESLSEND 159
            |||..:|..:|::|.|...||.||:     .:.|.:...|...:::|.  .::....|::.:..|
Zfish    90 DCAHEKNFDICKEFGIHFYPTFRYFKAHDTTNDFGKTYQGADRELQTV--RQLMVNFIQNHTRQD 152

  Fly   160 YSESKGVKPI-FDPIEPGNKLNDIYEQFDNKVTYILLVHPVD----MGIETILNMLPYPDVGVR- 218
            :       |: ..|:.|. :..|:......|..:...|...|    :|.|.||:::||..:.|: 
Zfish   153 W-------PVGCPPLHPA-RSEDVLSLMGKKTEHYTAVIVEDGNSYIGREVILDLMPYEGLVVKR 209

  Fly   219 -IIKDAEMFAQFGLKPCKQMVALLNRSGKAQLIKPAGKSS------------SAYVESVAGLLHQ 270
             :..|..:..:.|:....          .|.|.:|.|..:            |::::.:.| :|:
Zfish   210 ALSSDQLLMDKLGISSVP----------SAYLFQPNGTHTVLNVQKKLRFFFSSFLKLLPG-VHR 263

  Fly   271 NGHTSMPTLPPAEPEYILSEGYDAFIVDYVLNSTKVLFQADLEQAIYQFLHVEIPKTAFISGFKF 335
            ...||  :|...:|..   .|..|.:.......:|| :.||||..::..|.||:.....:.|.:.
Zfish   264 KQSTS--SLQRPQPGI---NGQGAQVEWKEFKKSKV-YMADLESGLHYLLRVELATHKTLEGEEL 322

  Fly   336 KALRHIIRLFRRFNVLNRDGRRMLNSLVNHL--FEVTEITGEEFRDVVDDLQTRLDPIF-AEQ-Q 396
            |..:..:.:..:....::...::|.:|:..|  ..:.:|..:...|:|:: :.|:..:: :|| |
Zfish   323 KTFKDFVTVVAKLFPGHQSVVKLLETLLEWLVSLPLEKIPYDAILDLVNN-KMRISGLYLSEQVQ 386

  Fly   397 YVGCLGSTPHTRRFSCSLWTLFHYFTVLAAQMKVYPPSSVTIG--------LYGLAKF---FYDC 450
            :|||.||:...|.:.||||||||..||.||..   |.:....|        |..:.::   |:.|
Zfish   387 WVGCQGSSVALRGYPCSLWTLFHVLTVQAANR---PDALANTGFEDDPLAVLQTMRRYIGTFFGC 448

  Fly   451 KDGSMYFVKLAKRMNIAKVRTHDEEILWLWEAHNEVNEKLAGDASGDPRFPKVQFPERKHCPDCY 515
            ::...:|.::|:. ::.:|:|.||.:||||..||:||.:|:|..|.||.|||.|:|....||.|:
Zfish   449 QECGKHFEEMAQE-SLNQVKTVDEAVLWLWRKHNQVNARLSGSMSEDPMFPKTQWPTPDLCPTCH 512

  Fly   516 THS---GEFDRDEVLKYLKRVYNLS-----YLSGDAEP 545
            ...   ..::...||.:||:.|:.|     |.|..:||
Zfish   513 EEQEGLHVWNEQMVLAFLKQHYSASNISPKYSSSQSEP 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Qsox3NP_650997.1 PDI_a_QSOX 40..153 CDD:239290 33/117 (28%)
Evr1_Alr 413..503 CDD:282612 37/100 (37%)
qsox2XP_009300239.1 PDI_a_QSOX 30..141 CDD:239290 33/112 (29%)
Evr1_Alr 403..499 CDD:282612 36/99 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579249
Domainoid 1 1.000 45 1.000 Domainoid score I12168
eggNOG 1 0.900 - - E1_KOG1731
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H65608
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48718
OrthoDB 1 1.010 - - D158783at33208
OrthoFinder 1 1.000 - - FOG0001506
OrthoInspector 1 1.000 - - mtm6583
orthoMCL 1 0.900 - - OOG6_102428
Panther 1 1.100 - - O PTHR22897
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1232
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.720

Return to query results.
Submit another query.