DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Qsox3 and qsox2

DIOPT Version :9

Sequence 1:NP_650997.1 Gene:Qsox3 / 42582 FlyBaseID:FBgn0038918 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_001121505.1 Gene:qsox2 / 100158617 XenbaseID:XB-GENE-986398 Length:657 Species:Xenopus tropicalis


Alignment Length:568 Identity:150/568 - (26%)
Similarity:260/568 - (45%) Gaps:89/568 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LYSKEDNIHVVVGASLKKILAEPAMGKLVQFLNSYCGNCRRFAHTFRKMAVDLQKWNRVLRIYAV 99
            ||...|.:.::...|:.:.:...:...|::|.:|:||:|..:|.|:|.:|.|:..|:..::|..:
 Frog    26 LYGPADPLSILNKESVTRAVFNSSSAWLLEFYSSWCGHCINYAPTWRALARDVSDWDPAIKIGVL 90

  Fly   100 DCARLENVKLCRDFRITLTPTIRYYP------SKFQRIRHGIGTDIETTIPSEIADQLIESLSEN 158
            |||..:|...|:||.:||.||.|::.      ::.:..:.|...:|:|     :...:|:.|..:
 Frog    91 DCAEEDNYGTCKDFGVTLYPTFRFFKAFTTEFTQGENYKAGNDREIQT-----VRQVIIDFLQTS 150

  Fly   159 DYSESKGVKPIFDPIEPGNKLNDIYEQ---------FDNKVTYILLVHPVDMGIETILNMLPYPD 214
            .........|..:||. .::::.:..|         |:::.:|:        |.|.:|:::.|.:
 Frog   151 PAQSKPQACPTLEPIS-SSEISSLLTQKQSHYTAIIFESEESYV--------GREVMLDLIRYSN 206

  Fly   215 VGVRIIKDAEMFAQFGLKPCKQMVALLNRSG-----KAQLIKPAGKSSSAYVESVAGLLHQ-NGH 273
            :.||....::.             |:|.:.|     ...||:|.|  |...::.|..|..| :.|
 Frog   207 MVVRRALPSDK-------------AILEKLGIGSVPSCYLIQPNG--SHGLIKEVKCLRAQLSSH 256

  Fly   274 -TSMPTLPPAEPEYILSEGY--DAFIVDYVLN--STKVLFQADLEQAIYQFLHVEIPKTAFISGF 333
             .::|.:....|......|.  ||...|..:.  ....|:.||||..::..|..|:.....:.|.
 Frog   257 LKALPNVRKRLPSDTAHSGLNKDAQQGDVAMKEFDRSKLYMADLESGLHYVLRAELANHRTLEGE 321

  Fly   334 KFKALRHIIR-LFRRFNVLNRDGRRMLNSLVNHLFE------VTEITGEEFRDVVDDLQTRLDPI 391
            |.|..:..:. |::.|     .||..:..|:..|.|      :.:|..:...|:|:: :.|:..|
 Frog   322 KLKTFKDFVTILYKLF-----PGRPHVMKLLETLQEWLVSMPLDKIPYDAILDLVNN-RMRISGI 380

  Fly   392 FA--EQQYVGCLGSTPHTRRFSCSLWTLFHYFTVLAAQMKVYP-----------PSSVTIGLYGL 443
            |.  ..|:|||.||..|.|.:.||||.|||..||   |..|.|           |.:|...:...
 Frog   381 FLTNHTQWVGCRGSKSHLRGYPCSLWKLFHSLTV---QASVKPDALANTALGADPQAVLQTMRSY 442

  Fly   444 AKFFYDCKDGSMYFVKLAKRMNIAKVRTHDEEILWLWEAHNEVNEKLAGDASGDPRFPKVQFPER 508
            .:.|:.|::.:.:|..:||. .:..|||.|:.:||||..||.||.:|:|..|.||:|||||:|..
 Frog   443 IREFFGCRECAKHFEAMAKE-TMDSVRTPDQAVLWLWRKHNAVNNRLSGAPSEDPKFPKVQWPTS 506

  Fly   509 KHCPDCYTHSG----EFDRDEVLKYLKRVYNLSYLSGDAEPHSRRSNE 552
            ..|..|:..:|    .::.:|||.:|||.|....:|.:...|....:|
 Frog   507 DLCSACHGQTGGGTQSWNENEVLSFLKRYYGKQEISLEFADHRTEQSE 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Qsox3NP_650997.1 PDI_a_QSOX 40..153 CDD:239290 30/118 (25%)
Evr1_Alr 413..503 CDD:282612 37/100 (37%)
qsox2NP_001121505.1 PDI_a_QSOX 31..145 CDD:239290 30/118 (25%)
QSOX_Trx1 156..263 CDD:375557 25/130 (19%)
FAD_SOX 291..394 CDD:375797 27/108 (25%)
Evr1_Alr 403..503 CDD:368111 40/103 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 51 1.000 Domainoid score I11371
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H65608
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D158783at33208
OrthoFinder 1 1.000 - - FOG0001506
OrthoInspector 1 1.000 - - mtm9402
Panther 1 1.100 - - O PTHR22897
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
77.110

Return to query results.
Submit another query.