DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6678 and ATS1

DIOPT Version :9

Sequence 1:NP_650996.1 Gene:CG6678 / 42581 FlyBaseID:FBgn0038917 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_009382.2 Gene:ATS1 / 851213 SGDID:S000000018 Length:333 Species:Saccharomyces cerevisiae


Alignment Length:329 Identity:64/329 - (19%)
Similarity:114/329 - (34%) Gaps:78/329 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 AFG----RKLCLRGLLD-DGPNECVTLEATGNIRALAAADSHCLVLLQSGQLYRVQPKLQAELVA 111
            |||    |:|.|....| |.|...|..:....:|.:|...:|.::|...|.|.......:.||  
Yeast     6 AFGSNGQRQLGLGHDEDMDTPQRSVPGDDGAIVRKIACGGNHSVMLTNDGNLVGCGDNRRGEL-- 68

  Fly   112 VRLEAAPRSNSGTKRSI--FGAAKAPSSPIIEHIACGSHINVAISSENCVYSIPSCLHQFSERQF 174
                    .::...|.:  :...:.| :|::: :|||....|.:.::..|:......::|:::..
Yeast    69 --------DSAQALRQVHDWRPVEVP-APVVD-VACGWDTTVIVDADGRVWQRGGGCYEFTQQHV 123

  Fly   175 -------RVKQLQCGHEHAVLLNANGDVFTWGNGLRGQLGLAELRVEETPQLLEALAGIKITQIA 232
                   |:....|.....|:....  |:.||:..:.||...:.|..:.|.|:.....:.:..:|
Yeast   124 PLNSNDERIAVYGCFQNFVVVQGTR--VYGWGSNTKCQLQEPKSRSLKEPVLVYDTGSVAVDYVA 186

  Fly   233 AGGWHSAAISAFGDLYTWGLNCSGQLGLRVMKPGGVLKEPTVFPLPQLQDLPECA--CSQSG--- 292
            .|......:...|.:    ::.||:|             ||.|.|.|.|......  |..:.   
Yeast   187 MGKDFMVIVDEGGRI----VHASGRL-------------PTGFELKQQQKRHNLVVLCMWTSIHL 234

  Fly   293 ---------------------ESNDDCAPLRVFAGSRHTLLI-------RRCGRLWVSGWCKHGQ 329
                                 :...|...:.|..||.|.:|.       ..|..::..||.:||.
Yeast   235 WNARLNTVESFGRGTHSQLFPQERLDFPIVGVATGSEHGILTTANQEGKSHCYNVYCWGWGEHGN 299

  Fly   330 LGRQ 333
            .|.|
Yeast   300 CGPQ 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6678NP_650996.1 ATS1 <78..371 CDD:227511 54/298 (18%)
RCC1_2 176..205 CDD:290274 5/28 (18%)
RCC1 192..241 CDD:278826 10/48 (21%)
RCC1_2 228..257 CDD:290274 4/28 (14%)
ATS1NP_009382.2 ATS1 1..333 CDD:227511 64/329 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.