DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6678 and PRAF1

DIOPT Version :10

Sequence 1:NP_650996.1 Gene:CG6678 / 42581 FlyBaseID:FBgn0038917 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_565144.1 Gene:PRAF1 / 844030 AraportID:AT1G76950 Length:1103 Species:Arabidopsis thaliana


Alignment Length:259 Identity:69/259 - (26%)
Similarity:107/259 - (41%) Gaps:38/259 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 NSGTKRSIFGAAKAPSSPIIE-----HIACGSHINVAISSENCVY-------SIPSCLHQFSERQ 173
            :|....|..|:|...|..:.:     .:.|.:.:.|.| .:|..|       .:|..|.  |...
plant   219 SSAQSSSSHGSAADDSDALGDVYIWGEVICDNVVKVGI-DKNASYLTTRTDVLVPKPLE--SNIV 280

  Fly   174 FRVKQLQCGHEHAVLLNANGDVFTWGNGLRGQLGLAELRVEETPQLLEAL-AGIKITQIAAGGWH 237
            ..|.|:.||..||..:...|::||||....|:||....:....|:|:|:| |...:..:|.|.:|
plant   281 LDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFH 345

  Fly   238 SAAISAFGDLYTWGLNCSGQLGLRVMKPGGVLKEPTVFPLPQLQDLPECACSQSGESNDDCAPLR 302
            :.|::..|:||||| :.:..:||                |....|:......:...|.:......
plant   346 TCAVTLAGELYTWG-DGTHNVGL----------------LGHGSDISHWIPKRIAGSLEGLHVAS 393

  Fly   303 VFAGSRHTLLIRRCGRLWVSGWCKHGQLGR-QLQDLSYVDAFQALEGITMNPTVDDVLCGPWST 365
            |..|..||.||...|||:..|....|.||. ..:.:.|....::|.|:.   |: .|.||.|.|
plant   394 VSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLR---TI-AVSCGVWHT 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6678NP_650996.1 ATS1 175..>331 CDD:444065 45/156 (29%)
PRAF1NP_565144.1 PH_PLC_plant-like 14..124 CDD:270171
ATS1 285..624 CDD:444065 55/190 (29%)
FYVE 627..695 CDD:214499
COG1340 <828..909 CDD:440951
BRX_N 879..>908 CDD:404581
BRX 1022..1077 CDD:429960
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.