DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6678 and AT1G65920

DIOPT Version :9

Sequence 1:NP_650996.1 Gene:CG6678 / 42581 FlyBaseID:FBgn0038917 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_176767.1 Gene:AT1G65920 / 842904 AraportID:AT1G65920 Length:1006 Species:Arabidopsis thaliana


Alignment Length:367 Identity:83/367 - (22%)
Similarity:140/367 - (38%) Gaps:105/367 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 QHECVSGDVDCAA-GFSELNA--PVSTQNQCTISIGWRYAALAFGRKLCLRGLLDDGPNECVTLE 74
            :..|:|..:.|:: .|:|.:|  |||:..:............:.|.:||                
plant   184 EERCLSNGLSCSSDSFAESDALGPVSSYYETDYDFRNSDCDRSTGSELC---------------- 232

  Fly    75 ATGNIRALAAADSHCLVLLQSGQLYRVQPKLQAELVAVRLEAAPRSNSGTKRSIFGAAKAPSSPI 139
                              ..|.|.:...|.|     ::..:...|||......|:||        
plant   233 ------------------RFSSQRFAASPPL-----SIITQPVTRSNVLKDIMIWGA-------- 266

  Fly   140 IEHIACGS-HINVAISSENCVYSIPSCLHQFSERQFRVKQLQCGHEHAVLLNANGDVFTWGNGLR 203
            |..:..|| :.|.|:|        |..|.  |...|.|:.:..|.:||.|:...|:||.||||..
plant   267 ITGLIDGSKNQNDALS--------PKLLE--SATMFDVQSISLGAKHAALVTRQGEVFCWGNGNS 321

  Fly   204 GQLGLAELRVE-ETPQLLEALAGIKITQIAAGGWHSAAISAFGDLYTWGLNCSGQLGLRVMKPGG 267
            |:||| ::.:: :.|:.:|:|..:.:..:|.....:.|::..|:||.||::            ||
plant   322 GKLGL-KVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWGID------------GG 373

  Fly   268 VLKEP-TVFPLPQLQDLPECACSQSGESNDDCAPLRVFAGSRHTLLIRRCGRLWVSGWCKHGQLG 331
            .:::. :.|...::.|:          .......|.|..|:.||.::...|:|:..|....|.||
plant   374 TIEQSGSQFLTRKISDV----------LGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLG 428

  Fly   332 RQLQDLSYVDAFQALEGITMNPTVD--------DVLCGPWST 365
            .           .:||.:|....|:        .|.||||.|
plant   429 H-----------GSLESVTKPKEVESLRRMKVISVSCGPWHT 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6678NP_650996.1 ATS1 <78..371 CDD:227511 71/299 (24%)
RCC1_2 176..205 CDD:290274 12/28 (43%)
RCC1 192..241 CDD:278826 15/49 (31%)
RCC1_2 228..257 CDD:290274 7/28 (25%)
AT1G65920NP_176767.1 PH_PLC_plant-like 14..126 CDD:270171
ATS1 <291..646 CDD:227511 52/203 (26%)
FYVE 639..699 CDD:366594
Smc <798..>864 CDD:224117
BRX_N 839..874 CDD:372684
BRX 948..1001 CDD:369842
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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