DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6678 and AT1G19880

DIOPT Version :10

Sequence 1:NP_650996.1 Gene:CG6678 / 42581 FlyBaseID:FBgn0038917 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_173417.2 Gene:AT1G19880 / 838576 AraportID:AT1G19880 Length:538 Species:Arabidopsis thaliana


Alignment Length:226 Identity:54/226 - (23%)
Similarity:85/226 - (37%) Gaps:67/226 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 CGHEHAVLLNANGDVFTWGNGLRGQLGLAELRVEETPQLLEALAGIKITQIAAGGWHSAAISAFG 245
            |...|.|.|:..|..:|||...:||||..::...:.|.::..|:..||.:.|||..|:..:|..|
plant    65 CASFHCVALDVEGRCYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKHKIVKAAAGRNHTVVVSDDG 129

  Fly   246 DLYTWGLNCSGQLGLRVMKPGGVLKEPTVFPLP-------------------------------- 278
            ....:|.|..|||||...|.|.|..|....|||                                
plant   130 QSLGFGWNKYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTVWLSSTEGASILTAG 194

  Fly   279 --------------------------QLQDLPECACSQSGESNDDCAPLRVFAGSRHTLLIRRCG 317
                                      :.|..|:...|.:||:     .::|..|:.||:.:.:.|
plant   195 LPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGET-----IVKVACGTNHTVAVDKNG 254

  Fly   318 RLWVSGWCKHGQLGRQLQDLSY----VDAFQ 344
            .::..|:..:|:||.:.|...:    :|.||
plant   255 YVYTWGFGGYGRLGHREQKDEWAPRRIDVFQ 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6678NP_650996.1 ATS1 175..>331 CDD:444065 48/207 (23%)
AT1G19880NP_173417.2 ATS1 61..405 CDD:444065 54/226 (24%)

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