DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6678 and RUG2

DIOPT Version :10

Sequence 1:NP_650996.1 Gene:CG6678 / 42581 FlyBaseID:FBgn0038917 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_199644.2 Gene:RUG2 / 834886 AraportID:AT5G48330 Length:455 Species:Arabidopsis thaliana


Alignment Length:338 Identity:87/338 - (25%)
Similarity:132/338 - (39%) Gaps:111/338 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GDVDCAAGFSELNAPVSTQNQCT-----ISIGWRYA-ALAFGRKLCLRGLLDDG--PNECVTLEA 75
            |.:....|..|...|...:|...     :|:||.:| ||....|:...|.:.||  .|..:.|||
plant   168 GQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHALALTVDGKVFGWGYVADGRVGNVGLPLEA 232

  Fly    76 T-------GNIRALAAADSHCLVLLQSGQLYRVQPKLQAELVAVRLEAAPRSNSGTKRSIFGAAK 133
            :       |:::...||          |.|              .||||.:.             
plant   233 SLLDSITDGSMKGHHAA----------GDL--------------NLEAAEKK------------- 260

  Fly   134 APSSPIIEHIACGSHINVAISSENCVYSIP----SCLHQFSERQFRVKQLQCGHEHAVLLNANGD 194
                 ::|          |:|.||   .:|    .||.:.:..: :|..:.||.:|:::|..:|.
plant   261 -----VVE----------AMSKEN---DMPIAWEPCLVEETCNE-KVADIACGSDHSLILCHDGT 306

  Fly   195 VFTWGNGLRGQLGLAELRVEETPQLLEALAGIKITQ----IAAGGWHSAAISAFGD--LYTWGLN 253
            :.:.|:.:.||||.::..:...|        :.||:    ||||..||.||...|:  :.:||.|
plant   307 LLSAGSNIYGQLGRSKQDLGMKP--------VDITESPISIAAGLGHSLAICNRGERNILSWGWN 363

  Fly   254 CSGQLGLRVMKPGGVLKEPTVFPLPQLQDLPECACSQSGESNDDCAPLRVFAGSRHTLLIRRCGR 318
            .|.|||..  ||               ::||.......|||     |..|.||..|:|.:...|.
plant   364 RSRQLGRG--KP---------------ENLPREVEGFDGES-----PASVSAGRVHSLCVTEKGE 406

  Fly   319 LWVSGWCKHGQLG 331
            .||.|..|:|:||
plant   407 AWVWGCGKNGRLG 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6678NP_650996.1 ATS1 175..>331 CDD:444065 49/161 (30%)
RUG2NP_199644.2 ATS1 45..429 CDD:444065 87/338 (26%)

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