DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6678 and AT3G55580

DIOPT Version :9

Sequence 1:NP_650996.1 Gene:CG6678 / 42581 FlyBaseID:FBgn0038917 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_191117.1 Gene:AT3G55580 / 824723 AraportID:AT3G55580 Length:488 Species:Arabidopsis thaliana


Alignment Length:395 Identity:101/395 - (25%)
Similarity:155/395 - (39%) Gaps:91/395 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FGQHEC-----VSGDVD---CAAGFSELNAPVSTQNQCTISIGWRYAALAFGRKLCLRGLLDDGP 67
            :|..||     |.|.||   |....|.....||:.:|...|.|        |....:.|.....|
plant   141 WGWRECIPTGRVFGQVDGDSCERNISFSTEQVSSSSQGKKSSG--------GTSSQVEGRGGGEP 197

  Fly    68 NE--------------------------CVTLEATG-NIRALAAADSHCLVLLQSGQLYRVQPKL 105
            .:                          |:...|.| .|.::||...|.|.|...||::......
plant   198 TKKRRISPSKQAAENSSQSDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGG 262

  Fly   106 QAEL---VAVRLEAAPRSNSGTKRSIFGAAKAPSSPIIEHIACGSHINVAISSENCVYSIPSCLH 167
            :.:|   ..|||.::|......:.|.:|.|.:....:...:.||..:.                 
plant   263 EGQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGVNMSSVVQCGRVLG----------------- 310

  Fly   168 QFSERQFRVKQLQCGHEHAVLLNANGDVFTWGNGLRGQLGLAELRVEETPQLLEALAGIKITQIA 232
                  ..||::.||..|:.::...|.:.|:|.||.||.|......|.:|..:.:|.||:|.::|
plant   311 ------SYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVA 369

  Fly   233 AGGWHSAAISAFGDLYTWGLNCSGQLGLRVMKPGGVLKEPTVFPLPQLQDLPECACSQSGESNDD 297
            ||.||:...|:.||:|.:|.|..||||.      |..:..|   ||:|.:.|..         ::
plant   370 AGLWHTTCASSDGDVYAFGGNQFGQLGT------GCDQAET---LPKLLEAPNL---------EN 416

  Fly   298 CAPLRVFAGSRHTLLIRRCGRLWVSGWCKHGQLGRQLQDLSYVDAFQALEGITMNPTVDDVLCGP 362
            .....:..|:|||.:|...||::..||.|:||||  :.|:  :|.....|....:....::.||.
plant   417 VNVKTISCGARHTAVITDEGRVFCWGWNKYGQLG--IGDV--IDRNAPAEVRIKDCFPKNIACGW 477

  Fly   363 WSTLL 367
            |.|||
plant   478 WHTLL 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6678NP_650996.1 ATS1 <78..371 CDD:227511 81/293 (28%)
RCC1_2 176..205 CDD:290274 10/28 (36%)
RCC1 192..241 CDD:278826 19/48 (40%)
RCC1_2 228..257 CDD:290274 12/28 (43%)
AT3G55580NP_191117.1 ATS1 83..463 CDD:227511 94/374 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 92 1.000 Inparanoid score I2259
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 1 1.000 - - FOG0003064
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.830

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