DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6678 and AT3G53830

DIOPT Version :9

Sequence 1:NP_650996.1 Gene:CG6678 / 42581 FlyBaseID:FBgn0038917 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_001327553.1 Gene:AT3G53830 / 824550 AraportID:AT3G53830 Length:500 Species:Arabidopsis thaliana


Alignment Length:413 Identity:102/413 - (24%)
Similarity:152/413 - (36%) Gaps:103/413 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FGQHECV-SGDVDCAAGFSELNAPVSTQNQCTI---SIGWRYAALAFGRKLCLRGLLDD------ 65
            :|..||: |.|            ||..|...:.   .|||.    .||..:.:..||.|      
plant   129 WGWKECIPSKD------------PVGKQQSGSSEQGDIGWD----IFGCSVVIFLLLMDMVTFSI 177

  Fly    66 -------------------GPNECVTLEATGNIRALAAAD---SHCLVLLQSGQLYRVQPKLQAE 108
                               ..|:.|..|:....|...|.|   .|    ...|..:...|.|.:.
plant   178 VIVSPASQGSNAASGTTLQNENQKVGEESVKRRRVSTAKDETEGH----TSGGDFFATTPSLVSV 238

  Fly   109 LVAVRLEAAPRSNSGTKR-----SIFGAAKAPSSPIIEHIACGSHINVAISSEN---CVYSIPS- 164
            .:.||:.:.......|..     .|:|.......    .:..||.|.: :||.:   |:.||.| 
plant   239 GLGVRITSVATGGRHTLALSDLGQIWGWGYGGEG----QLGLGSRIKM-VSSPHLIPCLESIGSG 298

  Fly   165 -----CLHQ-----FSERQFR-----VKQLQCGHEHAVLLNANGDVFTWGNGLRGQLGLAELRVE 214
                 .|||     .|.:..|     :|.:.||..|:..:...|.:.|:|.||.||.|......:
plant   299 KERSFILHQGGTTTTSAQASREPGQYIKAISCGGRHSAAITDAGGLITFGWGLYGQCGHGNTNDQ 363

  Fly   215 ETPQLLEALAGIKITQIAAGGWHSAAISAFGDLYTWGLNCSGQLGLRVMKPGGVLKEPTVFPLPQ 279
            ..|..:..:..:::..:|||.||:..||:.|.:|.:|.|..||||     .|....|    .||:
plant   364 LRPMAVSEVKSVRMESVAAGLWHTICISSDGKVYAFGGNQFGQLG-----TGTDHAE----ILPR 419

  Fly   280 LQDLPECACSQSGESNDDCAPLRVFAGSRHTLLIRRCGRLWVSGWCKHGQLGRQLQDLSYVDAFQ 344
            |.|         |::.:......|..|:||:.::...|:|...||.|:||||....:...:....
plant   420 LLD---------GQNLEGKHAKAVSCGARHSAVLAEDGQLLCWGWNKYGQLGLGDTNDRNIPTQV 475

  Fly   345 ALEGITMNPTVDDVLCGPWSTLL 367
            .|:|..:.    .|.||.|.|||
plant   476 QLDGCRLR----KVACGWWHTLL 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6678NP_650996.1 ATS1 <78..371 CDD:227511 83/317 (26%)
RCC1_2 176..205 CDD:290274 9/28 (32%)
RCC1 192..241 CDD:278826 14/48 (29%)
RCC1_2 228..257 CDD:290274 11/28 (39%)
AT3G53830NP_001327553.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 92 1.000 Inparanoid score I2259
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 1 1.000 - - FOG0003064
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.830

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