DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6678 and AT3G26100

DIOPT Version :9

Sequence 1:NP_650996.1 Gene:CG6678 / 42581 FlyBaseID:FBgn0038917 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_001326163.1 Gene:AT3G26100 / 822208 AraportID:AT3G26100 Length:532 Species:Arabidopsis thaliana


Alignment Length:291 Identity:68/291 - (23%)
Similarity:117/291 - (40%) Gaps:58/291 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 NIRALAAA--DSHCLVLLQSGQLYRV----QPKLQAELVAVRLEAAPRSNSGTKRSIFGAAKAPS 136
            ||..:.||  :....||.:.|::|..    ..:|..:..|..:|  ||...|...::        
plant   248 NIFVVQAAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVE--PRPLLGPLENV-------- 302

  Fly   137 SPIIEHIACGSHINVAISSE---NCVYSI------------------PSCLHQFSERQFRVKQLQ 180
             |::: ||.|....:|::.:   ..|||:                  |..:.||.....:.:.:.
plant   303 -PVVQ-IAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVA 365

  Fly   181 CGHEHAVLLNANGDVFTWGNGLRGQLGLAELRVEETPQLLEALAGIKITQIAAGGWHSAAISAFG 245
            .|..||.::..:|.|.|||.|..|.||......|..|:::|.|:.:|...:|.|.:.:..:|..|
plant   366 AGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDG 430

  Fly   246 DLYTWGLNCSGQLGLRVM------KPGGVLKEPTVFPLPQLQD-LPECACSQSGESNDDCAPLRV 303
            |:|::|...|..||....      :...||....|..|.|:.: :.:.:.:.|            
plant   431 DVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNS------------ 483

  Fly   304 FAGSRHTLLIRRCGRLWVSGWCKHGQLGRQL 334
            ...:.||..:...|:|:..|....||||.:|
plant   484 IYWNAHTFALTESGKLFAFGAGDQGQLGTEL 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6678NP_650996.1 ATS1 <78..371 CDD:227511 68/291 (23%)
RCC1_2 176..205 CDD:290274 9/28 (32%)
RCC1 192..241 CDD:278826 16/48 (33%)
RCC1_2 228..257 CDD:290274 8/28 (29%)
AT3G26100NP_001326163.1 ATS1 154..527 CDD:227511 68/291 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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