DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6678 and AT3G02510

DIOPT Version :9

Sequence 1:NP_650996.1 Gene:CG6678 / 42581 FlyBaseID:FBgn0038917 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_186900.3 Gene:AT3G02510 / 821100 AraportID:AT3G02510 Length:393 Species:Arabidopsis thaliana


Alignment Length:400 Identity:94/400 - (23%)
Similarity:152/400 - (38%) Gaps:91/400 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GFNAFGQHECVSGDVDCAAGFSELNAPVSTQNQCTI-------SIGWRYAALAFGRKLCLRGLLD 64
            |.|...:..||   |:....:|..:....::|...|       :.||..           ||.|.
plant    21 GTNEEKEWACV---VEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQ-----------RGTLG 71

  Fly    65 DGP-----NECVTLEATGNIRALAAADS--HCLVLLQSGQLYR---------VQPKLQAELVAVR 113
            ..|     |....::|..|::...||..  |||.:...|:.|.         .:..|:.|:    
plant    72 HQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEM---- 132

  Fly   114 LEAAPRSNSGTKRSIFGAAKAPSSPIIEHIACGSHINVAISSENCVYS-----IPSCLHQFS--- 170
                   ....:|.|....:......:..:|.|...:|.::.|..|::     .|..:.|.|   
plant   133 -------GRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPV 190

  Fly   171 --ERQFRVKQLQCGHEHAVLLNANGDVFTWGNGLRGQLGLAELRVEETPQLLEALAGIKITQIAA 233
              :....|:.:..|..|.:.|..:|.:..|||...||||..:.:....|..::.|..:.:..|||
plant   191 RVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAA 255

  Fly   234 GGWHSAAISAFGDLYTWGLNCSGQLGLRVMKPGGVLKEPTVFP----LPQLQDLPECACSQSGES 294
            |||||.|::..|::|.||....|:|||     |...|...:.|    |...:|:.:.:|      
plant   256 GGWHSTALTDKGEVYGWGRGEHGRLGL-----GDNDKSSKMVPQKVNLLAEEDIIQVSC------ 309

  Fly   295 NDDCAPLRVFAGSRHTLLIRRCGRLWVSGWCKHGQL--GRQL---QDLSYVDAFQALEGITMNPT 354
                       |..|::.:.|.||::..|...||:|  ||::   |.|.........|| :.|.|
plant   310 -----------GGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEG-SFNHT 362

  Fly   355 VDDVLCGPWS 364
             |:...|.||
plant   363 -DEEEEGKWS 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6678NP_650996.1 ATS1 <78..371 CDD:227511 77/316 (24%)
RCC1_2 176..205 CDD:290274 8/28 (29%)
RCC1 192..241 CDD:278826 18/48 (38%)
RCC1_2 228..257 CDD:290274 13/28 (46%)
AT3G02510NP_186900.3 ATS1 6..387 CDD:227511 93/399 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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