DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6678 and rcbtb2

DIOPT Version :10

Sequence 1:NP_650996.1 Gene:CG6678 / 42581 FlyBaseID:FBgn0038917 Length:373 Species:Drosophila melanogaster
Sequence 2:XP_005173422.1 Gene:rcbtb2 / 794652 ZFINID:ZDB-GENE-071016-3 Length:527 Species:Danio rerio


Alignment Length:328 Identity:75/328 - (22%)
Similarity:129/328 - (39%) Gaps:86/328 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 RKLCLRGLLDDGPNECVTLEATGNIRALAAADSHCLVL--LQSGQLYRVQPK-----LQAELVAV 112
            |:.|:.|   ...||.:.:.....:.||....|.||.|  .||    .::|:     ...:::::
Zfish    22 RQACVFG---SAANEAIYVTVNDEVFALGTNCSGCLGLGDTQS----TIEPRRIDILCGKKIISL 79

  Fly   113 RLEAAP--------------------RSNSGTKRSIFGAAKAPSSPI---IEHIACGSHINVAIS 154
            .....|                    :..:||.......|...::.|   :..::||||..:|::
Zfish    80 SYGTGPHVVIATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLIGKRVTEVSCGSHHTIALT 144

  Fly   155 SENCVYS----------------------IPSCLHQFSERQFRVKQLQCGHEHAVLLNANGDVFT 197
            ::..||:                      :.|||     :...|..:.||...::.:..||:.:.
Zfish   145 TDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCL-----QNKVVVNIACGQLCSMAVLDNGETYG 204

  Fly   198 WGNGLRGQLGLAELRVEETPQLLEALAGIKITQIAAGGWHSAAISAFGDLYTWGLNCSGQLGLRV 262
            ||....|||||.....::||..:.||.||.|.|:|.|..|:.|::..|.:|:||.|..||||...
Zfish   205 WGYNCNGQLGLGNNGNQQTPCRIAALQGINIIQVACGYAHTLALTDEGFVYSWGANSYGQLGTGN 269

  Fly   263 MKPGGVLKEPTVFPLPQLQDLPECACSQSGESNDDCAPLRVFAGSRHTLLIR-RCGRLWVSGWCK 326
            .....|   ||:..:.:.:.:...||..|                 ||...: :.|::.:.|.|:
Zfish   270 KSNQAV---PTLINMDKERMVEVAACHTS-----------------HTSAAKTQSGQVLMWGQCR 314

  Fly   327 HGQ 329
             ||
Zfish   315 -GQ 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6678NP_650996.1 ATS1 175..>331 CDD:444065 46/156 (29%)
rcbtb2XP_005173422.1 ATS1 37..>312 CDD:444065 66/303 (22%)
BTB_POZ_RCBTB2_CHC1L 350..466 CDD:349663
BACK_RCBTB2 463..527 CDD:350604
Blue background indicates that the domain is not in the aligned region.

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