Sequence 1: | NP_650996.1 | Gene: | CG6678 / 42581 | FlyBaseID: | FBgn0038917 | Length: | 373 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001347539.1 | Gene: | Rcbtb1 / 71330 | MGIID: | 1918580 | Length: | 531 | Species: | Mus musculus |
Alignment Length: | 351 | Identity: | 78/351 - (22%) |
---|---|---|---|
Similarity: | 128/351 - (36%) | Gaps: | 103/351 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 CAAGFSELNAPVSTQNQCTISIGWRYAALAFGRKLCLRGLLDDGPNECV----TLEAT--GNIRA 81
Fly 82 LA-AADSHCLVLLQSGQLYRVQPKLQAELVAVRLEAAPRSNSGTKRSIFGAAKAPSSPIIE---H 142
Fly 143 IACGSHINVAISSE---------NC-------------VYSIPSCLHQFSERQFRVKQLQCGHEH 185
Fly 186 AVLLNANGDVFTWGNGLRGQLGLAELRVEETPQLLEALAGIKITQIAAGGWHSAAISAFGDLYTW 250
Fly 251 GLNCSGQLGLRVMKPGGVLKEPTVFPLPQLQDLPECACSQSGESNDDCAPLRVFAGSRHTLLIRR 315
Fly 316 C------------GRLWVSGWCKHGQ 329 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG6678 | NP_650996.1 | ATS1 | <78..371 | CDD:227511 | 64/290 (22%) |
RCC1_2 | 176..205 | CDD:290274 | 7/28 (25%) | ||
RCC1 | 192..241 | CDD:278826 | 18/48 (38%) | ||
RCC1_2 | 228..257 | CDD:290274 | 11/28 (39%) | ||
Rcbtb1 | NP_001347539.1 | RCC1 1 | 40..91 | 13/61 (21%) | |
ATS1 | 43..>316 | CDD:227511 | 70/331 (21%) | ||
RCC1 2 | 93..145 | 12/62 (19%) | |||
RCC1 3 | 147..198 | 9/55 (16%) | |||
RCC1 4 | 199..250 | 19/50 (38%) | |||
RCC1 5 | 252..302 | 15/80 (19%) | |||
RCC1 6 | 304..356 | 5/14 (36%) | |||
BTB_POZ_RCBTB1_CLLD7 | 350..466 | CDD:349662 | |||
BACK_RCBTB1 | 466..531 | CDD:350603 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |