DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6678 and RCC2

DIOPT Version :10

Sequence 1:NP_650996.1 Gene:CG6678 / 42581 FlyBaseID:FBgn0038917 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_061185.1 Gene:RCC2 / 55920 HGNCID:30297 Length:522 Species:Homo sapiens


Alignment Length:222 Identity:55/222 - (24%)
Similarity:92/222 - (41%) Gaps:55/222 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 RVKQLQCGH--EHAVLLNANGDVFTWGNGLRGQLGLAELRVEETPQLLEALAGIKITQIAAGGWH 237
            ||:.:..|.  .|::|:...|.:::||...:||||..:.:..|.|:|:|.|:...|...|.|..|
Human   149 RVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNH 213

  Fly   238 SAAISAFGDLYTWGLNCSGQLGL-----RVMKPGGVLKEPTVFPLPQLQDLPECACSQSGESNDD 297
            :.|::..|.::.:|.|..|||||     .|..|..::...        |.:.:.||         
Human   214 TLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNG--------QPITKMAC--------- 261

  Fly   298 CAPLRVFAGSRHTLLIRRCGRLWVSGWCKHGQLGRQLQDLSYVDAFQALE----------GITMN 352
                    |:..::::...|.|:..|..::||||.. .|..::...|.:|          .|.:.
Human   262 --------GAEFSMIMDCKGNLYSFGCPEYGQLGHN-SDGKFIARAQRIEYDCELVPRRVAIFIE 317

  Fly   353 PTVD------------DVLCGPWSTLL 367
            .|.|            ||.||...||:
Human   318 KTKDGQILPVPNVVVRDVACGANHTLV 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6678NP_650996.1 ATS1 175..>331 CDD:444065 41/162 (25%)
RCC2NP_061185.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..83
RCC1 1 103..165 4/15 (27%)
ATS1 151..502 CDD:444065 53/220 (24%)
RCC1 2 168..219 17/50 (34%)
RCC1 3 221..271 14/74 (19%)
RCC1 4 273..347 19/73 (26%)
Required for interaction with RAC1. /evidence=ECO:0000269|PubMed:28869598 318..325 2/6 (33%)
RCC1 5 348..401
RCC1 6 403..447
RCC1 7 448..501
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 502..522
Blue background indicates that the domain is not in the aligned region.

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