Protein Alignment CG6678 and rpgrb

DIOPT Version :10

• Sequence 1: NP_650996.1
• Gene: CG6678 / 42581
• FlyBaseID: FBgn0038917
• Length: 373
• Species: Drosophila melanogaster
• Sequence 2: NP_001299605.1
• Gene: rpgrb / 557752
• ZFINID: ZDB-GENE-081015-2
• Length: 1413
• Species: Danio rerio
• Alignment Length: 377
• Identity: 90/377 - (23%)
• Similarity: 146/377 - (38%)
• Gaps: 96/377 - (25%)

  Fly    49 AALAFGRKLCLRGLLDDGPNECVTLEATGNIRALAAADSHCLVLLQSGQLYRVQPKLQAELVAVR 113
            |...||:.    ...|:.|:: ..|:....:| ::..|.|..::.::|:|:........:|
Zfish    14 AVFTFGKS----KFADNAPSK-FWLKNDVPLR-ISCGDEHTALVTENGKLFMFGSNNWGQL---- 68

  Fly   114 LEAAPRSNSGTKRSIF--GAAKAPSSPIIEHIACGSHINVAISSENCVYS----------IPSC- 165
                   ..|||.::.  ...||..|..::..|||....:..:|...:|:          :..|
Zfish    69 -------GLGTKTTVNKPTCVKALKSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCN 126

  Fly   166 ------LHQFSERQFRVKQLQCGHEHAVLLNANGDVFTWGNGLRGQLGLAELRVEETPQLLEALA 224
                  |.:|..:|..:|.|..|...:..|..:|.::.||:...||:||.:.....|||  |...
Zfish   127 DRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQ--EVSV 189

  Fly   225 GIKITQIAAGGWHSAAISAFGDLYTWGLNCSGQLGLRVMKPGGVLKEPTVFPLPQLQDLP----E 285
            |.::..::.|.:|||.::..|.|||:|...||:|||...|... .|.|     .|:.|:|    :
Zfish   190 GKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLAN-HKVP-----QQVTDIPDRVVQ 248

  Fly   286 CAC---------------------SQSGESN---DDCAPLRVF------------AGSRHTLLIR 314
            .||                     .|.|...   :...| ||.            .|..||.||.
Zfish   249 VACGGGHTVALTENEVYSFGLGQFGQLGHGTFIFESRLP-RVVEHFRKGRVKHAACGENHTALIT 312

  Fly   315 RCGRLWVSGWCKHGQLGRQLQDLSYVDAFQALEGITMNPT-----VDDVLCG 361
            ..|.|:..|..:||:||  |.:.::.:.|:.    |:.|.     |..|.||
Zfish   313 DNGLLYTFGDGRHGKLG--LGEENFTNQFKP----TLCPRFLDYHVHSVTCG 358

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6678	NP_650996.1	ATS1	175..>331	CDD:444065	53/195 (27%)
rpgrb	NP_001299605.1	ATS1	40..365	CDD:444065	84/346 (24%)