Protein Alignment CG6678 and rcc1

DIOPT Version :9

• Sequence 1: NP_650996.1
• Gene: CG6678 / 42581
• FlyBaseID: FBgn0038917
• Length: 373
• Species: Drosophila melanogaster
• Sequence 2: NP_001016101.1
• Gene: rcc1 / 548855
• XenbaseID: XB-GENE-979094
• Length: 420
• Species: Xenopus tropicalis
• Alignment Length: 288
• Identity: 71/288 - (24%)
• Similarity: 114/288 - (39%)
• Gaps: 59/288 - (20%)

  Fly    61 GLLDDGPNECVTLEATGN--IRALAAADSHCLVLLQSGQLYRVQPKLQAELVAVRLEAAPR--SN 121
            |||:......|.::...|  :..:|:.:.|.::|...|.||......|.:|..|     |.  :|
 Frog   156 GLLEPMKKSMVPVQMQINAPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLGRV-----PERFTN 215

  Fly   122 SGTKRS---------IFGAAKAPSSPIIEHIACGSHINVAISSENCVYSIP-SCLHQFSERQ--- 173
            .|.::.         |...||.......:.:.||::...|:|.|..||... |..||...:.
 Frog   216 RGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYGFGLSNYHQLGTKTTQS 280

  Fly   174 -FRVKQLQC-------------GHEHAVLLNANGDVFTWGNGLRGQLGLAELRVEE--TPQLLEA 222
             |..:.|..             |..|.:.:::.|.|::.|....|:|||.| ..||  .|..:..
 Frog   281 CFAPQNLTSFKNSTKSWVGFSGGQHHTICVDSEGKVYSLGRAEYGRLGLGE-NAEELSEPTPIPI 344

  Fly   223 LAGIKITQIAAGGWHSAAISAFGDLYTWGLNCSGQLGLRVMKPGGVLKEPTVFPLPQLQDLPECA 287
            |.  |...:|.|...|.|:|..|.::.||:..:.|||..        :|..|:. ||
 Frog   345 LP--KTKSVACGASVSYAVSNDGRVFAWGMGTNLQLGTG--------EEEDVWS-PQ-------- 390

  Fly   288 CSQSGESNDDCAPLRVFAGSRHTLLIRR 315
             ..:|:..:|...|.|.:|.:||:|:.|
 Frog   391 -EMTGKQLEDRDVLSVSSGGQHTVLLVR 417

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6678	NP_650996.1	ATS1	<78..371	CDD:227511	67/271 (25%)
		RCC1_2	176..205	CDD:290274	6/41 (15%)
		RCC1	192..241	CDD:278826	16/50 (32%)
		RCC1_2	228..257	CDD:290274	8/28 (29%)
rcc1	NP_001016101.1	ATS1	21..418	CDD:227511	71/288 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1062377at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010