Protein Alignment CG6678 and rcc1l

DIOPT Version :9

• Sequence 1: NP_650996.1
• Gene: CG6678 / 42581
• FlyBaseID: FBgn0038917
• Length: 373
• Species: Drosophila melanogaster
• Sequence 2: NP_001007510.1
• Gene: rcc1l / 493236
• XenbaseID: XB-GENE-963910
• Length: 449
• Species: Xenopus tropicalis
• Alignment Length: 288
• Identity: 70/288 - (24%)
• Similarity: 102/288 - (35%)
• Gaps: 67/288 - (23%)

  Fly   135 PSSPIIEHIACG-SHINVAISSE-----------NC--------VYSIPSCLHQFSERQFRVKQL 179
            |....:..::|| :|..:....|           .|        :||....:|:..|...||.|:
 Frog   156 PQETKVLQVSCGRAHSLILTDKEGVFSLGNNSYGQCAREVIEGEIYSESQLIHRVRELDSRVVQV 220

  Fly   180 QCGHEHAVLLNANGDVFTWGNGLRGQLGLAELRVEETPQLLEA-LAGIKITQIAAGGWHSAAISA 243
            .||.:|::.....|:|::.|.|..||.||....|...|..|.. :||:.|.|:|..|....|:|.
 Frog   221 ACGQDHSLFRTEKGEVYSCGWGADGQTGLGHFNVCSNPTKLGGDMAGVNIVQVATYGDCCLAVSE 285

  Fly   244 FGDLYTWG--------------------------------LNCSGQLGLRVMKPGGVL------- 269
            .|.||.||                                :.|.|...:.|...|.|.
 Frog   286 EGQLYGWGNSEYLQLACVTDSTQVNVPQHLPFQHVGKVKHVACGGTGCIAVNGDGSVFVWGYGIL 350

  Fly   270 -KEPTVFPLPQLQDLPECACSQSGESNDDCAPLRVFAGSRHTLLIRRCGRLWVSGWCKHGQLGRQ 333
             |.|......|.:.:|:.....| :.|.|....:||:|..|...:...|.|:|.|....|.||..
 Frog   351 GKGPNFLEAQQPEIIPQSLFGLS-DFNPDIRVTKVFSGLGHFAALNNRGELFVWGKNLRGCLGTG 414

  Fly   334 LQDLSYVDAFQALEGITMNPTVDDVLCG 361
            ..:..|..     ..:|:...|.||.||
 Frog   415 RFEDQYFP-----WRVTVPGEVVDVSCG 437

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6678	NP_650996.1	ATS1	<78..371	CDD:227511	70/288 (24%)
		RCC1_2	176..205	CDD:290274	9/28 (32%)
		RCC1	192..241	CDD:278826	17/49 (35%)
		RCC1_2	228..257	CDD:290274	12/60 (20%)
rcc1l	NP_001007510.1	RCC1	<51..374	CDD:332518	50/218 (23%)
		RCC1_2	381..410	CDD:316098	8/28 (29%)
		RCC1	398..444	CDD:306840	14/45 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1062377at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010