| Sequence 1: | NP_650996.1 | Gene: | CG6678 / 42581 | FlyBaseID: | FBgn0038917 | Length: | 373 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001012074.1 | Gene: | Herc4 / 309758 | RGDID: | 1310971 | Length: | 1057 | Species: | Rattus norvegicus |
| Alignment Length: | 335 | Identity: | 82/335 - (24%) |
|---|---|---|---|
| Similarity: | 128/335 - (38%) | Gaps: | 116/335 - (34%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 62 LLDDG---------------------PNECVTLEATGNIRALAAADSHCLVLLQSGQLYRVQPKL 105
Fly 106 QAELVAVRLEAAPRSNSGTKRSIFGAAKAPSSPIIEHIACGSHINVAISSENCVYSIPSCLHQFS 170
Fly 171 ERQFRVKQLQCGHEHAVLLNANGDVFTWGNGLRGQLGLA-ELRVEETPQLLEALAGIKITQIAAG 234
Fly 235 GWHSAAISAFGDLYTWGLNCSGQLGLRVMKPGGVLKEPTVFPLPQLQDLPECACSQSGESNDDCA 299
Fly 300 P-----LR------VFAGSRHTLLIRRCGRLWVSGWCKHGQLGRQ--LQDLSYVDAFQALEGITM 351
Fly 352 NPTVDDVLCG 361 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG6678 | NP_650996.1 | ATS1 | <78..371 | CDD:227511 | 74/298 (25%) |
| RCC1_2 | 176..205 | CDD:290274 | 9/28 (32%) | ||
| RCC1 | 192..241 | CDD:278826 | 23/49 (47%) | ||
| RCC1_2 | 228..257 | CDD:290274 | 11/28 (39%) | ||
| Herc4 | NP_001012074.1 | RCC1 1 | 1..51 | 0/1 (0%) | |
| RCC1 | 3..49 | CDD:278826 | 82/335 (24%) | ||
| RCC1 2 | 52..101 | 12/49 (24%) | |||
| RCC1 | 52..99 | CDD:278826 | 11/47 (23%) | ||
| RCC1 3 | 102..154 | 17/95 (18%) | |||
| RCC1 | 102..152 | CDD:278826 | 16/93 (17%) | ||
| RCC1 4 | 156..207 | 23/50 (46%) | |||
| RCC1 | 157..205 | CDD:278826 | 23/47 (49%) | ||
| RCC1 5 | 208..259 | 17/81 (21%) | |||
| RCC1 | 208..257 | CDD:278826 | 17/79 (22%) | ||
| RCC1 | 260..308 | CDD:278826 | 11/48 (23%) | ||
| RCC1 6 | 261..311 | 11/47 (23%) | |||
| RCC1 7 | 313..366 | ||||
| RCC1 | 313..>343 | CDD:278826 | |||
| HECTc | 709..1055 | CDD:238033 | |||
| HECTc | 735..1054 | CDD:214523 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.920 | |||||