DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6678 and Zzef1

DIOPT Version :9

Sequence 1:NP_650996.1 Gene:CG6678 / 42581 FlyBaseID:FBgn0038917 Length:373 Species:Drosophila melanogaster
Sequence 2:XP_006246919.1 Gene:Zzef1 / 287476 RGDID:1311189 Length:2965 Species:Rattus norvegicus


Alignment Length:79 Identity:23/79 - (29%)
Similarity:29/79 - (36%) Gaps:24/79 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   257 QLGLRVMKPGGVLKEPTVFPLPQLQDLPE----CACSQSGESNDDCAPLRVFAGSRHTLL-IRRC 316
            |.|..::|.  :|.|..|.|...|..:.|    .||.|:|...     |:..    |.|| |.||
  Rat  2807 QTGFEILKQ--MLSEERVVPHLPLGKIWEWLVGVACRQTGHQR-----LKAI----HLLLRIVRC 2860

  Fly   317 GRLWVSGWCKHGQL 330
                    |.|..|
  Rat  2861 --------CSHSDL 2866

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6678NP_650996.1 ATS1 <78..371 CDD:227511 23/79 (29%)
RCC1_2 176..205 CDD:290274
RCC1 192..241 CDD:278826
RCC1_2 228..257 CDD:290274 23/79 (29%)
Zzef1XP_006246919.1 EFh <94..141 CDD:238008
APC10-ZZEF1 250..380 CDD:176488
CUB <1119..1189 CDD:294042
ZZ_EF 1779..1826 CDD:239083
ZZ 1828..1875 CDD:239069
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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