DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6678 and Sergef

DIOPT Version :10

Sequence 1:NP_650996.1 Gene:CG6678 / 42581 FlyBaseID:FBgn0038917 Length:373 Species:Drosophila melanogaster
Sequence 2:XP_006541006.1 Gene:Sergef / 27414 MGIID:1351630 Length:465 Species:Mus musculus


Alignment Length:399 Identity:92/399 - (23%)
Similarity:133/399 - (33%) Gaps:100/399 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GFSELNAPVSTQNQCTISIGWR-YAALAFGRKLCLRGLLDDG--PNECVTLEATGNIRALAAADS 87
            ||....:|......|....|.. |..|..|.|       :|.  |.:.......|.|:::.....
Mouse     3 GFFPAPSPWGASCGCEACGGANSYGQLGLGHK-------EDVFLPQQLSDFCQAGCIKSVTGGGG 60

  Fly    88 HCLVLLQSGQLYRVQPKLQAELVAVRLEAAPRSNSGTKRSIFGAAKAPSSPIIEHIACGSHINVA 152
            |..|:...|.|:........:|.....|...|         |...|......|..:|||....:.
Mouse    61 HSAVVTDGGDLFVCGLNKDGQLGLGHTEEVLR---------FTICKPLRGCPIRQVACGWDFTIM 116

  Fly   153 ISSENCVYS-------------------IPSCLHQFSERQFRVKQLQCGHEHAVLLNANGDVFTW 198
            ::.:..|.|                   :|..:....|   :|..:..|..||:...|.|.||.|
Mouse   117 LTEKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECLRE---KVVCVAAGLRHALATTATGSVFQW 178

  Fly   199 GNGLRGQLGLAELRVEETPQLLEALAGIKITQI--------AAGGWHSAAISAFGDLYTWGLNCS 255
            |.||... |......:..|..|.|....::|.:        .||..|||:::..|:||.||.|..
Mouse   179 GTGLASS-GRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKH 242

  Fly   256 GQLGLRVMKPGGVLKEPTVFPLPQ------LQDLPECACSQSGESNDDCAPLRVFAGSRHTLLIR 314
            |||..|.:          ..||||      .||....|               |::|..|.:...
Mouse   243 GQLASRAV----------FLPLPQRIEAHYFQDEKVTA---------------VWSGWTHLVAKT 282

  Fly   315 RCGRLWVSGWCKHGQLGRQL----------QDLSYVDAFQALEGITMNPT-----VDDVLCGPWS 364
            ..|:::..|...:|||||:|          ||.|.  |||..:....:|.     ..::.||...
Mouse   283 ETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSL--AFQGPQNSVPSPLHCLTGATEISCGSEH 345

  Fly   365 TL--LHLKC 371
            .|  :..||
Mouse   346 NLAVIRDKC 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6678NP_650996.1 ATS1 175..>331 CDD:444065 46/169 (27%)
SergefXP_006541006.1 ATS1 19..377 CDD:444065 88/383 (23%)
RCC1 356..402 CDD:395335
Blue background indicates that the domain is not in the aligned region.

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