DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6678 and W09G3.7

DIOPT Version :9

Sequence 1:NP_650996.1 Gene:CG6678 / 42581 FlyBaseID:FBgn0038917 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_001021671.2 Gene:W09G3.7 / 173245 WormBaseID:WBGene00012370 Length:404 Species:Caenorhabditis elegans


Alignment Length:307 Identity:65/307 - (21%)
Similarity:108/307 - (35%) Gaps:104/307 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GFNAFGQHECVSGDVDCAAGFSE-----LNAPVS---TQNQCTISIGW----RYAALAFGRKLCL 59
            |.|.|||......::|...|..|     |:.|.|   ....|::...:    ..|..:|      
 Worm   146 GDNNFGQCGRNPENMDYVVGSEESPLLPLSFPTSEPIISIHCSMDTSFVVDSSGAVFSF------ 204

  Fly    60 RGLLDDGPNECVTLEATGNIRALAAADSHCLVLLQSGQLYRVQ---PKLQAELVAVRLEAAPRSN 121
             ||.:||  :|      ||                  :.|.:|   .|::.::...:::..    
 Worm   205 -GLNEDG--QC------GN------------------EAYGIQWEPAKVRGDVEGSKIQKV---- 238

  Fly   122 SGTKRSI----------------FGAAKAPSSPIIEHIACGSHINVAISSENCVYSIPSCLHQFS 170
            ||:..::                :|.|...:..|  .:....|:..::....||.|..|.:    
 Worm   239 SGSTDTLLACSENGEIFIWGQTEYGQAAGATDEI--QLNTSRHVANSLGPIICVDSTQSSV---- 297

  Fly   171 ERQFRVKQLQCGHEHAVLLNANGDVFTWGNGLRGQLGLAELRVEETPQLLE--ALAGIKITQIAA 233
                            |..|:.|:||.||.|:.| :| .|....:||..::  ...|..:|.::|
 Worm   298 ----------------VARNSRGNVFVWGVGVLG-MG-PEAESLKTPTQMDQPLFDGKMVTSVSA 344

  Fly   234 GGWHSAAISAFGDLYTWGLNCSGQLGL----------RVMKPGGVLK 270
            |....:||:..|.|:.||.|....|||          ::..||.|.|
 Worm   345 GNSCMSAINEDGRLFIWGENRYSSLGLGHQKRQLFPYQLFLPGDVRK 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6678NP_650996.1 ATS1 <78..371 CDD:227511 45/224 (20%)
RCC1_2 176..205 CDD:290274 8/28 (29%)
RCC1 192..241 CDD:278826 15/50 (30%)
RCC1_2 228..257 CDD:290274 10/28 (36%)
W09G3.7NP_001021671.2 ATS1 <108..347 CDD:227511 51/261 (20%)
RCC1 142..195 CDD:278826 12/48 (25%)
RCC1 198..239 CDD:278826 12/77 (16%)
RCC1 355..402 CDD:278826 12/37 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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