DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6678 and RCC1

DIOPT Version :10

Sequence 1:NP_650996.1 Gene:CG6678 / 42581 FlyBaseID:FBgn0038917 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_001041659.1 Gene:RCC1 / 1104 HGNCID:1913 Length:452 Species:Homo sapiens


Alignment Length:275 Identity:64/275 - (23%)
Similarity:97/275 - (35%) Gaps:77/275 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 PNECVTLEATGNIRALAAADSHCLVLLQSGQLYRVQPKLQAELVAVRLEAAPRSNSGTKRSIFGA 131
            |.:.|..||.|         .|.:.|.:|||:|......:..|             |...|:.|:
Human    97 PEDVVQAEAGG---------MHTVCLSKSGQVYSFGCNDEGAL-------------GRDTSVEGS 139

  Fly   132 AKAPSSPIIEHIACGSHINVAISSENCVYSIPSCLHQFSERQFRVKQLQCGHEHAVLLNANGDVF 196
            ...|..                                .|.|.:|.|:..|..|...|..:|.||
Human   140 EMVPGK--------------------------------VELQEKVVQVSAGDSHTAALTDDGRVF 172

  Fly   197 TWGN--GLRGQLGLAE-LRVEETPQLLEALAGIKITQIAAGGWHSAAISAFGDLYTWGLNCSGQL 258
            .||:  ...|.:||.| ::....|  ::....:.:.::|:|..|...::|.|||||.|....|||
Human   173 LWGSFRDNNGVIGLLEPMKKSMVP--VQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQL 235

  Fly   259 GLRVMKPGGVLKEPTVFP-------LPQLQDLPECACSQSGESNDDCAPLRVFAGSRHTLLIRRC 316
            |          :.|.:|.       |.:|. :|:|...:|..|.........|.|:..|..|...
Human   236 G----------RVPELFANRGGRQGLERLL-VPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHE 289

  Fly   317 GRLWVSGWCKHGQLG 331
            |.::..|...:.|||
Human   290 GHVYGFGLSNYHQLG 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6678NP_650996.1 ATS1 175..>331 CDD:444065 44/165 (27%)
RCC1NP_001041659.1 ATS1 60..420 CDD:444065 64/275 (23%)

Return to query results.
Submit another query.