DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6678 and Rcc2

DIOPT Version :10

Sequence 1:NP_650996.1 Gene:CG6678 / 42581 FlyBaseID:FBgn0038917 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_776292.1 Gene:Rcc2 / 108911 MGIID:1919784 Length:520 Species:Mus musculus


Alignment Length:222 Identity:57/222 - (25%)
Similarity:93/222 - (41%) Gaps:55/222 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 RVKQLQCGH--EHAVLLNANGDVFTWGNGLRGQLGLAELRVEETPQLLEALAGIKITQIAAGGWH 237
            ||:.:..|.  .|::|:...|.:::||...:||||..:.:..|.|:|:|||:...|...|.|..|
Mouse   147 RVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNH 211

  Fly   238 SAAISAFGDLYTWGLNCSGQLGL-----RVMKPGGVLKEPTVFPLPQLQDLPECACSQSGESNDD 297
            :.|::..|.::.:|.|..|||||     .|..|..::...        |.:.:.||         
Mouse   212 TLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNG--------QPITKMAC--------- 259

  Fly   298 CAPLRVFAGSRHTLLIRRCGRLWVSGWCKHGQLGRQLQDLSYVDAFQALE----------GITMN 352
                    |:..::|:...|.|:..|..::||||.. .|..::...|.:|          .|.:.
Mouse   260 --------GAEFSMLMDCKGNLYSFGCPEYGQLGHN-SDGKFIARAQRIEYDCELVPRRVAIFIE 315

  Fly   353 PTVD------------DVLCGPWSTLL 367
            .|.|            ||.||...||:
Mouse   316 KTKDGQILPVPNVVVRDVACGANHTLV 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6678NP_650996.1 ATS1 175..>331 CDD:444065 43/162 (27%)
Rcc2NP_776292.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..78
RCC1 1 101..163 4/15 (27%)
ATS1 149..500 CDD:444065 55/220 (25%)
RCC1 2 166..217 18/50 (36%)
RCC1 3 219..269 15/74 (20%)
RCC1 4 271..345 19/73 (26%)
Required for interaction with RAC1. /evidence=ECO:0000250|UniProtKB:Q9P258 316..323 2/6 (33%)
RCC1 5 346..399
RCC1 6 401..445
RCC1 7 446..499
Blue background indicates that the domain is not in the aligned region.

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