DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6678 and als2b

DIOPT Version :10

Sequence 1:NP_650996.1 Gene:CG6678 / 42581 FlyBaseID:FBgn0038917 Length:373 Species:Drosophila melanogaster
Sequence 2:XP_009300450.2 Gene:als2b / 100318899 ZFINID:ZDB-GENE-080929-1 Length:1706 Species:Danio rerio


Alignment Length:273 Identity:71/273 - (26%)
Similarity:111/273 - (40%) Gaps:67/273 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 RVQPKLQAELVAVRLEAAPRSNSGTKRSIFGAAKAPSSPIIEHIAC-------GSHINVAISSEN 157
            ||:.:|:.|          .|..|.|.|..|..:...:.:...::.       .:...|..||.|
Zfish   472 RVEERLRLE----------ESMQGKKSSSLGDIREEEAELSRRLSLPGLLSQDNAESEVKASSSN 526

  Fly   158 CVYSI-PSCLHQFSERQFRVKQLQCG---HEHAVLLNANGDVFTWGNGLRGQLGLAELRVEETPQ 218
            ....: |..|.:.|..:.|...|..|   ...|.|.:...:|::||.|..||||..:|.....|.
Zfish   527 TTTEVSPRLLRRTSRPRMRAVPLASGGIPETDAHLPSLQTEVWSWGQGQDGQLGHGDLLPRLQPD 591

  Fly   219 LLEALAGIKITQIAAGGWHSAAISAFGDLYTWGLNCSGQLGLRVMKPGGVLKEPTVFP-LPQLQD 282
            .:::|.|.::.::|||..||.|::|...:::||.|.||||        |.::.||.|| |.:|.|
Zfish   592 CVKSLNGKEVLKVAAGAHHSLALTAQSQVFSWGCNTSGQL--------GHMESPTTFPHLTKLSD 648

  Fly   283 LPECACSQSGESNDDCAPLRVF---AGSRHTLLIRRCGRLWVSGWCKHGQLGRQLQDLSYVDAFQ 344
                             .:||:   ||.:||||:       ..|.|        :|.:.|....|
Zfish   649 -----------------GIRVWDIGAGQQHTLLL-------ADGDC--------IQPILYYSGQQ 681

  Fly   345 ALEGITMNPTVDD 357
            ..|  ...||.::
Zfish   682 VKE--VPEPTEEE 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6678NP_650996.1 ATS1 175..>331 CDD:444065 49/162 (30%)
als2bXP_009300450.2 None

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