DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnd and ARL3

DIOPT Version :10

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_015274.1 Gene:ARL3 / 856056 SGDID:S000005972 Length:198 Species:Saccharomyces cerevisiae


Alignment Length:176 Identity:57/176 - (32%)
Similarity:101/176 - (57%) Gaps:9/176 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 NPEKEARILLLGLDNAGKTTILK------QLASEDITTVTPTAGFNIKSVAADGFK-LNVWDIGG 70
            |.:::..||:||||||||||.|:      .||.:.:..:.||.|.|:.::..|..: |..||:||
Yeast    13 NKKEQYSILILGLDNAGKTTFLETLKKEYSLAFKALEKIQPTVGQNVATIPVDSKQILKFWDVGG 77

  Fly    71 QWKIRPYWKNYFANTDVLIYVIDCTDRTRLPEAGSELFEMLMDNRLKQVPVLIFANKQDMPDAMS 135
            |..:|..|..|::....:|:::|.:||.||.|..:.|..::||..::.||:|:.|||||..|.|.
Yeast    78 QESLRSMWSEYYSLCHGIIFIVDSSDRERLDECSTTLQSVVMDEEIEGVPILMLANKQDRQDRME 142

  Fly   136 AAEVAEKMSLV--QLQGRTWEIKACTAVDGTGLKEGMDWVCKNMKK 179
            ..::.|..:.:  .:..|...:...:|:.|.|:|:.::|:...:::
Yeast   143 VQDIKEVFNKIAEHISARDSRVLPISALTGEGVKDAIEWMIVRLER 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721 57/171 (33%)
ARL3NP_015274.1 Arfrp1 19..185 CDD:206725 56/165 (34%)

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