DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnd and ARF3

DIOPT Version :9

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_014737.1 Gene:ARF3 / 854261 SGDID:S000005620 Length:183 Species:Saccharomyces cerevisiae


Alignment Length:162 Identity:72/162 - (44%)
Similarity:107/162 - (66%) Gaps:1/162 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KEARILLLGLDNAGKTTILKQLASEDITTVTPTAGFNIKSVAADGFKLNVWDIGGQWKIRPYWKN 80
            ||.:||:||||.|||||||.:|....|.|.|||.|||:::|.....|.|:||:|||.::||.|::
Yeast    16 KEMKILMLGLDKAGKTTILYKLKLNKIKTSTPTVGFNVETVTYKNVKFNMWDVGGQQRLRPLWRH 80

  Fly    81 YFANTDVLIYVIDCTDRTRLPEAGSELFEMLMDNRLKQVPVLIFANKQDMPDAMSAAEVAEKMSL 145
            ||..|..||:|||.:.|.|:.||..||:.::.:..::.|.:|::|||||:.|||...||::.:.|
Yeast    81 YFPATTALIFVIDSSARNRMEEAKEELYSIIGEKEMENVVLLVWANKQDLKDAMKPQEVSDFLEL 145

  Fly   146 VQ-LQGRTWEIKACTAVDGTGLKEGMDWVCKN 176
            .: |:.:.|.:....|:.|.||.||:.|:..|
Yeast   146 EKNLKNQPWCVIGSNALSGQGLVEGLSWISNN 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721 71/160 (44%)
ARF3NP_014737.1 Arf6 9..177 CDD:206716 71/160 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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