DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnd and ARL1

DIOPT Version :10

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_009723.3 Gene:ARL1 / 852462 SGDID:S000000368 Length:183 Species:Saccharomyces cerevisiae


Alignment Length:164 Identity:80/164 - (48%)
Similarity:119/164 - (72%) Gaps:0/164 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KEARILLLGLDNAGKTTILKQLASEDITTVTPTAGFNIKSVAADGFKLNVWDIGGQWKIRPYWKN 80
            ||.|||:||||.|||||||.:|...::.|..||.|||:::::....||||||:|||..|||||:.
Yeast    17 KELRILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNVETLSYKNLKLNVWDLGGQTSIRPYWRC 81

  Fly    81 YFANTDVLIYVIDCTDRTRLPEAGSELFEMLMDNRLKQVPVLIFANKQDMPDAMSAAEVAEKMSL 145
            |:|:|..:|:|:|.||:.|:..|..||..||.:..|:...:|:||||||.|.|:||:||:::::|
Yeast    82 YYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQPGALSASEVSKELNL 146

  Fly   146 VQLQGRTWEIKACTAVDGTGLKEGMDWVCKNMKK 179
            |:|:.|:|.|.|.:|:.|.|:.||:||:...:|:
Yeast   147 VELKDRSWSIVASSAIKGEGITEGLDWLIDVIKE 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721 79/159 (50%)
ARL1NP_009723.3 Arl1 20..177 CDD:206718 77/156 (49%)

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