DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnd and SAR1B

DIOPT Version :10

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_176029.1 Gene:SAR1B / 842086 AraportID:AT1G56330 Length:193 Species:Arabidopsis thaliana


Alignment Length:171 Identity:61/171 - (35%)
Similarity:86/171 - (50%) Gaps:12/171 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EKEARILLLGLDNAGKTTILKQLASEDITTVTPTAGFNIKSVAADGFKLNVWDIGGQWKIRPYWK 79
            :|||:||.||||||||||:|..|..|.:....||.....:.::....|...:|:||....|..||
plant    18 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWK 82

  Fly    80 NYFANTDVLIYVIDCTDRTRLPEAGSELFEMLMDNRLKQVPVLIFANKQDMPDAMSAAEVAEKMS 144
            :|:|..|.::|::|..|:.|..|:..||..:|.|..|..||.||..||.|:|.|.|..|:...:.
plant    83 DYYAKVDAVVYLVDAYDKERFAESKRELDALLSDEALATVPFLILGNKIDIPYAASEDELRYHLG 147

  Fly   145 LVQL---QG---------RTWEIKACTAVDGTGLKEGMDWV 173
            |...   :|         |..|:..|:.|...|..||..|:
plant   148 LTNFTTGKGKVTLGDSGVRPLEVFMCSIVRKMGYGEGFKWL 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721 61/171 (36%)
SAR1BNP_176029.1 SAR 4..192 CDD:197556 61/171 (36%)

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