DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnd and ARFD1B

DIOPT Version :10

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_171745.3 Gene:ARFD1B / 839242 AraportID:AT1G02430 Length:190 Species:Arabidopsis thaliana


Alignment Length:176 Identity:66/176 - (37%)
Similarity:104/176 - (59%) Gaps:12/176 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EKEARILLLGLDNAGKTTILKQL-ASEDITTVTPTAGFNIKSVAADGFKLNVWDIGGQ--WKIRP 76
            ::|:||:|.|||.|||::|:.:| ..|.:||..||.|.:::||......|..|::|||  :|..|
plant    15 QEESRIVLFGLDAAGKSSIMHKLKTGETLTTTMPTIGTDVESVKYKDSNLRFWEMGGQQCYKWFP 79

  Fly    77 YWKNYFANTDVLIYVIDCTDRTRLPEAGSELFEMLMDNRLKQVP----VLIFANKQDMPDAMSAA 137
            ..|:.|.....|:.|:|.|||.|:.:| .:....::|.....||    ||:|.||.::|.||||:
plant    80 MTKHDFQEIAGLVLVVDSTDRDRIEDA-KDFLNAVIDEIQGSVPDNVAVLVFGNKHEVPGAMSAS 143

  Fly   138 EVAEKMSLVQLQ----GRTWEIKACTAVDGTGLKEGMDWVCKNMKK 179
            |::.|:.|..|:    .|.|.:::..|..|.||.||:||:.||.::
plant   144 EISNKLDLTSLRQKNWQRNWHVQSSCAFSGDGLHEGLDWLLKNAER 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721 64/171 (37%)
ARFD1BNP_171745.3 Arf_Arl 19..186 CDD:206644 63/167 (38%)

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