DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnd and ARLA1D

DIOPT Version :10

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_569051.1 Gene:ARLA1D / 836892 AraportID:AT5G67560 Length:184 Species:Arabidopsis thaliana


Alignment Length:182 Identity:43/182 - (23%)
Similarity:58/182 - (31%) Gaps:68/182 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   358 EEEDQQQQQQQQQQSQQTELRTAEIALMLPVDDGSSELGAVGEAHDT--RPPLPVTVEPAEDGVE 420
            ||..:|.|.:.:.......|:.|              |..:|:...|  ..|:|   .|.:|...
plant   735 EESAEQAQHRDEMLKMYRALKEA--------------LCIIGDISTTTISTPMP---PPVDDSWL 782

  Fly   421 PPAPSRTRRRSISRQEAIIVEPTGSSLENVSNASESRPTTPPRPVPDIHTSSDELDCQQQQQQRD 485
            ......|.|||          ||.|             .||.|..|.:..:              
plant   783 QVQNMPTGRRS----------PTSS-------------PTPQRRAPAVPPT-------------- 810

  Fly   486 RAAQRGRAASMGPILAGATVRPAPPQESPPPSA----GPTVQLP------PP 527
            |...||.|.  ||...|:|:..|||..|.|.::    ||..|:|      ||
plant   811 RPGSRGPAP--GPPPPGSTLGSAPPVPSRPGASPDPFGPPPQIPSRPNRAPP 860

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721
ARLA1DNP_569051.1 Arl10_like 21..179 CDD:206724
Blue background indicates that the domain is not in the aligned region.

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