DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnd and ARLA1B

DIOPT Version :10

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_190555.2 Gene:ARLA1B / 824148 AraportID:AT3G49860 Length:176 Species:Arabidopsis thaliana


Alignment Length:177 Identity:57/177 - (32%)
Similarity:98/177 - (55%) Gaps:14/177 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LRPNPE-KEARILLLGLDNAGKTTILKQLA----SEDITTVTPTAGFNIKSVAADGFKLNVWDIG 69
            |:||.: ||..:.|:||.|:|||:::..:|    |||   :.||.|||::.|..:...:.:||:|
plant     3 LQPNLQAKEMELSLVGLQNSGKTSLVNVVATGEYSED---MIPTVGFNMRKVTKENVAIRLWDLG 64

  Fly    70 GQWKIRPYWKNYFANTDVLIYVIDCTDRTRLPEAGSELFEMLMDNRLKQVPVLIFANKQDMPDAM 134
            ||.:.|..|:.|.....:::||:|..|...|..:.|||.::|.:..|..:|:|:..||.|:..|:
plant    65 GQPRFRCMWERYCRAVSMIVYVVDAADTENLSVSRSELHDLLSNASLIGIPLLVLGNKIDIHGAL 129

  Fly   135 SAAEVAEKMSLVQLQGRTWEIKACTAV---DGTGLKEGMDWVCKNMK 178
            |...:.|:|.|..:..|  |: .|..:   :.|.:.:..||:..:.|
plant   130 SKEALTEEMGLSSVTSR--EV-CCLMISCKNPTTIDQLTDWLVNHSK 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721 56/173 (32%)
ARLA1BNP_190555.2 Arl10_like 13..171 CDD:206724 51/163 (31%)

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