DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnd and Arl13a

DIOPT Version :10

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_083223.1 Gene:Arl13a / 74448 MGIID:1921698 Length:372 Species:Mus musculus


Alignment Length:179 Identity:45/179 - (25%)
Similarity:92/179 - (51%) Gaps:17/179 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RKLRPNPEKEARILLLGLDNAGKTTIL----KQLASEDITTVTPTAGFNIKSVAADGFKLNVWDI 68
            :|.....::...|:::||||:||:.::    :.:.|:....:.||.    .::..|.::::::|:
Mouse    12 QKTTEEKQRNVTIIVIGLDNSGKSRLIEAFQRLIPSKMHKEMRPTQ----TTLLLDDYQVSIYDL 72

  Fly    69 GGQWKIRPYWKNYFANTDVLIYVIDCTDRTRLPEAGSELFEMLMDNRLKQVPVLIFANKQDMPDA 133
            .|..|.|..|.:|:|....||:|:|.:|..|:.|....|..::.|.|:...|:||.|||||..:|
Mouse    73 TGDVKGREKWSSYYAQAHGLIFVVDSSDIARIQEVKIILTRIMFDKRVSGKPILILANKQDKKNA 137

  Fly   134 MSAAEVAEKMSLVQLQGRT---WEIKACTAVDGTGLKE------GMDWV 173
            :...::.|.:.|.:|...|   ..::.|:.:.....::      |:.|:
Mouse   138 LLPCDIIEYLLLERLVNETRSMCRVEPCSTIKRIPKRQQKPIVVGLRWL 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721 45/179 (25%)
Arl13aNP_083223.1 Arl2l1_Arl13_like 23..189 CDD:133361 44/168 (26%)

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