DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnd and arl5c

DIOPT Version :10

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_001037909.1 Gene:arl5c / 733518 XenbaseID:XB-GENE-5898153 Length:179 Species:Xenopus tropicalis


Alignment Length:158 Identity:69/158 - (43%)
Similarity:105/158 - (66%) Gaps:0/158 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KEARILLLGLDNAGKTTILKQLASEDITTVTPTAGFNIKSVAADGFKLNVWDIGGQWKIRPYWKN 80
            :|.:::::|||||||||||.|....::....||.|.|::.:.:......:||||||..:|..|.:
 Frog    15 QEHKVIIVGLDNAGKTTILYQFLMNEVVHTAPTIGSNVEEIISRNTHFLMWDIGGQETLRATWNS 79

  Fly    81 YFANTDVLIYVIDCTDRTRLPEAGSELFEMLMDNRLKQVPVLIFANKQDMPDAMSAAEVAEKMSL 145
            |::||:.:|.|||.|||.||||...||::||....||...:||||||||:.|:|:|:|::..::|
 Frog    80 YYSNTEFVILVIDSTDRERLPETREELYKMLAHEELKDAAILIFANKQDVKDSMTASEISSSLAL 144

  Fly   146 VQLQGRTWEIKACTAVDGTGLKEGMDWV 173
            ..::.|.|.|:.|.|:.|.||..|:||:
 Frog   145 GAIRDRAWHIQGCCALTGEGLPAGLDWL 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721 69/158 (44%)
arl5cNP_001037909.1 Arl5_Arl8 3..175 CDD:133353 69/158 (44%)

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