DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnd and Arl13b

DIOPT Version :10

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_080853.3 Gene:Arl13b / 68146 MGIID:1915396 Length:427 Species:Mus musculus


Alignment Length:178 Identity:61/178 - (34%)
Similarity:102/178 - (57%) Gaps:10/178 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SLLRKLRPNPEKEARILLLGLDNAGKTTILKQLASEDITTVTPTAGFNIKSVAADGFKLNVWDIG 69
            :|.::.| .|.::..::::||||||||...|.:..|....|.||.||:...:....|::.::|:|
Mouse    10 NLFKRWR-EPVRKVTLVMVGLDNAGKTATAKGIQGEHPEDVAPTVGFSKIDLRQGKFQVTIFDLG 73

  Fly    70 GQWKIRPYWKNYFANTDVLIYVIDCTDRTRLPEAGSELFEMLMDNRLKQVPVLIFANKQDMPDAM 134
            |..:||..||||:|.:..:|:|:|.:|..|:.|....:.|:|...|:...|:|:.|||||...|:
Mouse    74 GGKRIRGIWKNYYAESYGVIFVVDSSDEERMEETKETMSEVLRHPRISGKPILVLANKQDKEGAL 138

  Fly   135 SAAEVAEKMSLVQLQGR---TWEIKACTAVDGTG------LKEGMDWV 173
            ..|:|.|.:||.:|...   ..:|:.|:||.|.|      :|:|:.|:
Mouse   139 GEADVIECLSLEKLVNEHKCLCQIEPCSAVLGYGKKIDKSIKKGLYWL 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721 61/178 (34%)
Arl13bNP_080853.3 Arl2l1_Arl13_like 23..189 CDD:133361 58/164 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 207..250
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 269..427
Blue background indicates that the domain is not in the aligned region.

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