DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnd and Arl6

DIOPT Version :10

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_001423263.1 Gene:Arl6 / 56297 MGIID:1927136 Length:221 Species:Mus musculus


Alignment Length:215 Identity:67/215 - (31%)
Similarity:111/215 - (51%) Gaps:45/215 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLLSLLRKLRPNPEKEARILLLGLDNAGKTTILKQL-----ASEDITTVTPTAGFNIKSVAADG 60
            ||||..|..|....:||..:|.|||||:|||||:.:|     .|:||   .||.||:|:...:..
Mouse     1 MGLLDRLSGLLGLKKKEVHVLCLGLDNSGKTTIINKLKPSNAQSQDI---VPTIGFSIEKFKSSS 62

  Fly    61 FKLNVWDIGGQWKIRPYWKNYFANTDVLIYVIDCTDRTRLPEAGSEL------------------ 107
            ....|:|:.||.:.|..|::|:.:...:|:|||.:|:.|:..|..||                  
Mouse    63 LSFTVFDMSGQGRYRNLWEHYYKDGQAIIFVIDSSDKLRMVVAKEELDTLLNHPGMQKPTKAIRM 127

  Fly   108 -------------------FEMLMDNRLKQVPVLIFANKQDMPDAMSAAEVAEKMSLVQLQGRTW 153
                               |:..:|.:.:::|:|.||||.|:.|::::.:|::.:.|..::.:.|
Mouse   128 CQSFWNWRFGQFGTPDQFIFKCCLDIKHRRIPILFFANKMDLRDSVTSVKVSQLLCLESIKDKPW 192

  Fly   154 EIKACTAVDGTGLKEGMDWV 173
            .|.|..|:.|.||:||:||:
Mouse   193 HICASDAIKGEGLQEGVDWL 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721 65/213 (31%)
Arl6NP_001423263.1 Arl6 19..215 CDD:206722 59/197 (30%)

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