DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnd and arl3a

DIOPT Version :9

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_001315350.1 Gene:arl3a / 550525 ZFINID:ZDB-GENE-050417-368 Length:182 Species:Danio rerio


Alignment Length:177 Identity:114/177 - (64%)
Similarity:143/177 - (80%) Gaps:0/177 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLLSLLRKLRPNPEKEARILLLGLDNAGKTTILKQLASEDITTVTPTAGFNIKSVAADGFKLNV 65
            |||||:||||:..|::|.|||||||||.||||:|||||||||:.:|||.|||||||.:.||||||
Zfish     1 MGLLSILRKLKSAPDQEVRILLLGLDNGGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNV 65

  Fly    66 WDIGGQWKIRPYWKNYFANTDVLIYVIDCTDRTRLPEAGSELFEMLMDNRLKQVPVLIFANKQDM 130
            ||||||.||||||:|||.|||:||||||..||.|..|.|.||.|:|.:.:|..|||||||||||:
Zfish    66 WDIGGQRKIRPYWRNYFENTDMLIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLIFANKQDL 130

  Fly   131 PDAMSAAEVAEKMSLVQLQGRTWEIKACTAVDGTGLKEGMDWVCKNM 177
            ..|..|:|:||.::|..::.|.|:|::|:|:.|.|:::||.|||||:
Zfish   131 LTAAPASEIAEGLNLHIIRDRMWQIQSCSALTGEGVQDGMSWVCKNV 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721 110/172 (64%)
arl3aNP_001315350.1 Arl3 3..176 CDD:206721 110/172 (64%)
SAR 15..177 CDD:197556 103/161 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 235 1.000 Domainoid score I2294
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 243 1.000 Inparanoid score I3284
OMA 1 1.010 - - QHG56336
OrthoDB 1 1.010 - - D1271528at2759
OrthoFinder 1 1.000 - - FOG0003664
OrthoInspector 1 1.000 - - otm24371
orthoMCL 1 0.900 - - OOG6_104284
Panther 1 1.100 - - O PTHR45697
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2537
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.980

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