DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnd and arl4c

DIOPT Version :10

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_001016707.1 Gene:arl4c / 549461 XenbaseID:XB-GENE-998820 Length:193 Species:Xenopus tropicalis


Alignment Length:158 Identity:64/158 - (40%)
Similarity:96/158 - (60%) Gaps:6/158 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 ILLLGLDNAGKTTILKQLASEDITTVTPTAGFNIKSV-----AADGFKLNVWDIGGQWKIRPYWK 79
            |::||||:|||||:|.:|...:.....||.|||.:.:     ||.|...:.||:|||.|:||.||
 Frog    16 IVMLGLDSAGKTTVLYRLKFNEFVNTVPTIGFNTERIRLSNGAAKGISCHFWDVGGQEKLRPLWK 80

  Fly    80 NYFANTDVLIYVIDCTDRTRLPEAGSELFEMLMDNRLKQVPVLIFANKQDMPDAMSAAEVAEKMS 144
            :|...||.:|||:|..|..||.||.:||.::.........|:|:.|||||:|.:::..|:..:::
 Frog    81 SYSRCTDGIIYVVDSVDSDRLEEAKTELHKVTKFAENLGTPLLVIANKQDLPKSLAVPEIERQLA 145

  Fly   145 LVQLQGRT-WEIKACTAVDGTGLKEGMD 171
            |.:|...| :.::...|:.|.||.||||
 Frog   146 LQELSPSTPYHVQPACAIIGEGLTEGMD 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721 64/158 (41%)
arl4cNP_001016707.1 Arl4_Arl7 11..193 CDD:206719 64/158 (41%)

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