DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnd and sar1b

DIOPT Version :10

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_001015871.1 Gene:sar1b / 548588 XenbaseID:XB-GENE-944209 Length:198 Species:Xenopus tropicalis


Alignment Length:171 Identity:53/171 - (30%)
Similarity:84/171 - (49%) Gaps:12/171 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EKEARILLLGLDNAGKTTILKQLASEDITTVTPTAGFNIKSVAADGFKLNVWDIGGQWKIRPYWK 79
            :|..:::.||||||||||:|:.|....:....||.....:.:...|.....:|:||..:.|..||
 Frog    23 KKTGKLVFLGLDNAGKTTLLQMLKDGRMGQYVPTLHPTSEELTIAGMTFTTFDLGGHTQARRVWK 87

  Fly    80 NYFANTDVLIYVIDCTDRTRLPEAGSELFEMLMDNRLKQVPVLIFANKQDMPDAMSAAEVAE--- 141
            ||....:.::::|||.|..||.|:..||..::.|..:..||:|:..||.|.|:|:|...:..   
 Frog    88 NYLPAINGIVFLIDCADHDRLSESKRELDALMADETIANVPILLLGNKIDRPEAISEERLLHLFG 152

  Fly   142 ---------KMSLVQLQGRTWEIKACTAVDGTGLKEGMDWV 173
                     |:...||..|..|:..|:.:...|..||..|:
 Frog   153 IYGQTTGKGKVPQKQLANRPLEVFMCSILKRQGYGEGFRWL 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721 53/171 (31%)
sar1bNP_001015871.1 Sar1 3..197 CDD:206645 53/171 (31%)

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