DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dnd and arl14

DIOPT Version :10

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_001015791.1 Gene:arl14 / 548508 XenbaseID:XB-GENE-5750500 Length:201 Species:Xenopus tropicalis


Alignment Length:165 Identity:67/165 - (40%)
Similarity:105/165 - (63%) Gaps:2/165 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KEARILLLGLDNAGKTTILKQLASEDITTVTPTAGFNIKSVAAD-GFKLNVWDIGGQWKIRPYWK 79
            |:||||:||||:|||:|:|.:...::.....||.|||::.:..: ..:|.:||:|||.|:|.:|.
 Frog    12 KQARILILGLDDAGKSTVLYKFKFKEPFITIPTVGFNVEMIHTEKHLQLTMWDVGGQQKLRSFWC 76

  Fly    80 NYFANTDVLIYVIDCTDRTRLPEAGSELFEMLMDNRLKQVPVLIFANKQDMPDAMSAAEVAEKMS 144
            :||.|||.|:||:|..|...|.|:..|...:|.:..:|.|||::.|||||:|.|::|.|:..|.:
 Frog    77 HYFENTDGLVYVVDSNDSKHLDESKKEFQHVLQNELIKDVPVVLLANKQDLPGALNAEEITRKFN 141

  Fly   145 LVQ-LQGRTWEIKACTAVDGTGLKEGMDWVCKNMK 178
            :.: ...|.|.::.|.|..|.||.||:..|.:.:|
 Frog   142 MKKYCSDRDWYVQPCCAHTGQGLAEGLSKVTEFVK 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721 66/161 (41%)
arl14NP_001015791.1 ARLTS1 15..174 CDD:133356 64/158 (41%)

Return to query results.
Submit another query.