DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnd and arl1

DIOPT Version :10

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_001002473.1 Gene:arl1 / 436746 ZFINID:ZDB-GENE-040718-175 Length:181 Species:Danio rerio


Alignment Length:163 Identity:79/163 - (48%)
Similarity:111/163 - (68%) Gaps:0/163 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KEARILLLGLDNAGKTTILKQLASEDITTVTPTAGFNIKSVAADGFKLNVWDIGGQWKIRPYWKN 80
            :|.|||:||||.|||||||.:|...::.|..||.|||:::|.....|..|||:|||..|||||:.
Zfish    16 REMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRC 80

  Fly    81 YFANTDVLIYVIDCTDRTRLPEAGSELFEMLMDNRLKQVPVLIFANKQDMPDAMSAAEVAEKMSL 145
            |::|||.:|||:|.:||.|:..:.|||..||.:..||:..:::|||||||..||:..|||..:.|
Zfish    81 YYSNTDAVIYVVDSSDRDRMGISKSELVAMLEEEELKKAILVVFANKQDMEQAMTPTEVANALGL 145

  Fly   146 VQLQGRTWEIKACTAVDGTGLKEGMDWVCKNMK 178
            ..|:.|.|:|...:|..||||.|.|:|:.:::|
Zfish   146 PALKDRKWQIFKTSATKGTGLDEAMEWLVESLK 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721 78/159 (49%)
arl1NP_001002473.1 Arl1 19..175 CDD:206718 77/155 (50%)

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