DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnd and arl5a

DIOPT Version :10

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_001002339.1 Gene:arl5a / 436611 ZFINID:ZDB-GENE-040718-28 Length:179 Species:Danio rerio


Alignment Length:163 Identity:62/163 - (38%)
Similarity:103/163 - (63%) Gaps:0/163 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KEARILLLGLDNAGKTTILKQLASEDITTVTPTAGFNIKSVAADGFKLNVWDIGGQWKIRPYWKN 80
            :|.:::::|||||||||||.|.:..::...:||.|.|::.:..:.....:||||||..:|..|..
Zfish    15 QEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVVNNTHFLMWDIGGQESLRSSWNT 79

  Fly    81 YFANTDVLIYVIDCTDRTRLPEAGSELFEMLMDNRLKQVPVLIFANKQDMPDAMSAAEVAEKMSL 145
            |:.||:.:|.|:|.|||.|:.....||:.||....||:..:||||||||:...::.||:::.:.|
Zfish    80 YYTNTEFVIVVVDSTDRERISVTREELYRMLAHEDLKKAGLLIFANKQDVKGCLTVAEISQSLQL 144

  Fly   146 VQLQGRTWEIKACTAVDGTGLKEGMDWVCKNMK 178
            ..::...|.|:||.|:.|.||.:|::|:...::
Zfish   145 TSVKDHQWHIQACCALTGEGLCQGLEWMMSRLR 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721 62/159 (39%)
arl5aNP_001002339.1 Arl5_Arl8 3..175 CDD:133353 62/159 (39%)

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