DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnd and Arl8

DIOPT Version :10

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_649769.1 Gene:Arl8 / 40961 FlyBaseID:FBgn0037551 Length:186 Species:Drosophila melanogaster


Alignment Length:172 Identity:54/172 - (31%)
Similarity:93/172 - (54%) Gaps:15/172 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EKEARILLLGLDNAGKTTILKQLAS----EDITTVTPTAGFNIKSVAADGFKLNVWDIGGQWKIR 75
            ::|..:.|:||..:||||.:..:||    ||   :.||.|||::.:......:.|||||||.:.|
  Fly    18 KEEMELTLVGLQFSGKTTFVNVIASGQFAED---MIPTVGFNMRKITRGNVTIKVWDIGGQPRFR 79

  Fly    76 PYWKNYFANTDVLIYVIDCTDRTRLPEAGSELFEMLMDNRLKQVPVLIFANKQDMPDAMSAAEVA 140
            ..|:.|....:.::|::|..|..:|..:.:||..:|...:|..:|||:..||:|:|.|:....:.
  Fly    80 SMWERYCRGVNAIVYMVDAADLDKLEASRNELHSLLDKPQLAGIPVLVLGNKRDLPGALDETGLI 144

  Fly   141 EKMSLVQLQGRTWEI----KACTAVDGTGLKEGMDWVCKNMK 178
            |:|:|..:|.|  ||    .:|...|...:.  :.|:.::.|
  Fly   145 ERMNLSSIQDR--EICCYSISCKEKDNIDIT--LQWLIQHSK 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721 53/168 (32%)
Arl8NP_649769.1 Arl10_like 22..180 CDD:206724 52/164 (32%)

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