DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnd and arl4cb

DIOPT Version :10

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_998413.1 Gene:arl4cb / 406531 ZFINID:ZDB-GENE-040426-2382 Length:192 Species:Danio rerio


Alignment Length:158 Identity:65/158 - (41%)
Similarity:98/158 - (62%) Gaps:6/158 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 ILLLGLDNAGKTTILKQLASEDITTVTPTAGFNIKSV-----AADGFKLNVWDIGGQWKIRPYWK 79
            |::||||:|||||:|.:|...:.....||.|||.:.:     .|.|...:.||:|||.|:||.||
Zfish    16 IVMLGLDSAGKTTVLYRLKFNEFVNTVPTIGFNTEKIKLSNGTAKGISCHFWDVGGQEKLRPLWK 80

  Fly    80 NYFANTDVLIYVIDCTDRTRLPEAGSELFEMLMDNRLKQVPVLIFANKQDMPDAMSAAEVAEKMS 144
            :|...||.:|||:|..|..||.||.:||.::......:..|:|:.|||||:|.::|.|::.::::
Zfish    81 SYSRCTDGIIYVVDSVDVDRLEEAKTELHKVTKFAENQGTPLLVIANKQDLPKSLSVADIEKQLA 145

  Fly   145 LVQL-QGRTWEIKACTAVDGTGLKEGMD 171
            |.:| ...|:.|:...|:.|.||.||||
Zfish   146 LQELTPATTYHIQPACAIIGEGLHEGMD 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721 65/158 (41%)
arl4cbNP_998413.1 Arl4_Arl7 11..192 CDD:206719 65/158 (41%)

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