back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment dnd and ARF1

DIOPT Version :10

Sequence 1:	NP_650995.1	Gene:	dnd / 42580	FlyBaseID:	FBgn0038916	Length:	179	Species:	Drosophila melanogaster
Sequence 2:	NP_001649.1	Gene:	ARF1 / 375	HGNCID:	652	Length:	181	Species:	Homo sapiens

Alignment Length:	164	Identity:	81/164 - (49%)
Similarity:	112/164 - (68%)	Gaps:	0/164 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly    15 EKEARILLLGLDNAGKTTILKQLASEDITTVTPTAGFNIKSVAADGFKLNVWDIGGQWKIRPYWK 79
            :||.|||::|||.|||||||.:|...:|.|..||.|||:::|........|||:|||.||||.|:
Human    15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWR 79

  Fly    80 NYFANTDVLIYVIDCTDRTRLPEAGSELFEMLMDNRLKQVPVLIFANKQDMPDAMSAAEVAEKMS 144
            :||.||..||:|:|..||.|:.||..||..||.::.|:...:|:||||||:|:||:|||:.:|:.
Human    80 HYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLG 144

  Fly   145 LVQLQGRTWEIKACTAVDGTGLKEGMDWVCKNMK 178
            |..|:.|.|.|:|..|..|.||.||:||:...::
Human   145 LHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLR 178

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.