DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnd and arl4d

DIOPT Version :10

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_955938.1 Gene:arl4d / 323573 ZFINID:ZDB-GENE-030131-2293 Length:200 Species:Danio rerio


Alignment Length:187 Identity:65/187 - (34%)
Similarity:109/187 - (58%) Gaps:15/187 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LRKLRPNPE-----KEARILLLGLDNAGKTTILKQLASEDITTVTPTAGFN---IKSVAADG--F 61
            |.::.||..     :...::::|||::|||::|.:|..::.....||.|||   ||....:|  .
Zfish     5 LTEIAPNTPFLPNFQSLHVVVIGLDSSGKTSLLYRLKLKEFVETIPTKGFNTEKIKVPVGNGRAI 69

  Fly    62 KLNVWDIGGQWKIRPYWKNYFANTDVLIYVIDCTDRTRLPEAGSELFEMLMDNRLKQVPVLIFAN 126
            ....||:|||.|:||.||:|...||.:::|:|.|:..|:.||..||.::...:..:.||||:.||
Zfish    70 TFQAWDVGGQEKLRPLWKSYTRRTDGMVFVVDSTEVERMEEAKVELHKITRTSENQGVPVLVLAN 134

  Fly   127 KQDMPDAMSAAEVAEKMSLVQLQGRT-WEIKACTAVDGTGLKEGM----DWVCKNMK 178
            |||:|.|:..::|.:.:::.:|...| ..::.|:||||.||:.|:    |.:.|..|
Zfish   135 KQDLPVALPVSDVEKVLAVHELSASTLHHVQGCSAVDGQGLQLGLEKLYDMILKRKK 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721 63/183 (34%)
arl4dNP_955938.1 Arl4_Arl7 18..200 CDD:206719 62/174 (36%)

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