DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnd and Arl4c

DIOPT Version :10

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_796279.2 Gene:Arl4c / 320982 MGIID:2445172 Length:192 Species:Mus musculus


Alignment Length:158 Identity:64/158 - (40%)
Similarity:97/158 - (61%) Gaps:6/158 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 ILLLGLDNAGKTTILKQLASEDITTVTPTAGFNIKSV-----AADGFKLNVWDIGGQWKIRPYWK 79
            |::||||:|||||:|.:|...:.....||.|||.:.:     .|.|...:.||:|||.|:||.||
Mouse    16 IVMLGLDSAGKTTVLYRLKFNEFVNTVPTIGFNTEKIKLSNGTAKGISCHFWDVGGQEKLRPLWK 80

  Fly    80 NYFANTDVLIYVIDCTDRTRLPEAGSELFEMLMDNRLKQVPVLIFANKQDMPDAMSAAEVAEKMS 144
            :|...||.:|||:|..|..||.||.:||.::......:..|:|:.|||||:|.::..||:.::::
Mouse    81 SYSRCTDGIIYVVDSVDVDRLEEAKTELHKVTKFAENQGTPLLVIANKQDLPKSLPVAEIEKQLA 145

  Fly   145 LVQL-QGRTWEIKACTAVDGTGLKEGMD 171
            |.:| ...|:.::...|:.|.||.||||
Mouse   146 LHELIPATTYHVQPACAIIGEGLTEGMD 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721 64/158 (41%)
Arl4cNP_796279.2 Arl4_Arl7 11..192 CDD:206719 64/158 (41%)

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